Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0560 ATGTTAGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAAGGGGGTTGGTGGATTTGACCCTGATCCTTACCCTGCTCATCATGAGGGTTTGCTCAATAACTATGAAGAAAAATGTGTGACTAACTCACCCCCGACAGGGTTTTTTGCTCTTTATGTCGGAGAAGAGCGCCAAAGATACGTGGTTCCAACCCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACAATGAGTTTGGATTTTCTCAGAGGAATGGACTGGTAGTTCCATGCAGTGTTTCCACGTTTGAGGAGGTGTTGAATGCTGTAGAATGCAACAACGGCAAGTTTGACTTGGGAAAGTTTTTTGCAGAGTTTGTTTGA 384 0.4427 MLGKKMVSFKKLAKRVKGVGGFDPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAVECNNGKFDLGKFFAEFV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0560 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 127 IPR003676 GO:0009733
Vra3g0560 127 Pfam Auxin responsive protein 40 109 IPR003676 GO:0009733
Vra3g0560 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0560 Vra-Chr3 6186950 6187610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0560 36 113 Calmodulin-binding Proteins AT5G20810 47.561 1.23e-20 80.9