Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0531 ATGAACTTCAACAAGCAACTCTTTCTTCTTCTCAATCTTTTCTCAGTTCTATTTCTCTCTGGAGAAAGAGTGTTGCAAGCAGAGGCTGGCCATCATCACCATCACCATCACCATCATGGTCCGACAAAGTTGTTCGTTTTCGGAGACTCATATGCTGACACGGGCAACATTCAGAGAGCTGTTTCAAACTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGAAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCACCAATTCCCTACAGATATAGAAAACTGATGCCACAACATGTAAAATATGGGATGAACTTTGCGTTTGGAGGTACCGGTGTGTTCAACACGTTGGTTCCACTTCCAAACATGACAAACCAGATCGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTTGGATCTCACCAACTCAGTTGCCCTTGTTTCTGTCGCTGGAAATGACTACAGTCATTTCTTGCAAACAAATGGCTCTGAGGGTATAGCATCTTTCGTGGCTTCAGTGATTAATCAAACAACGATGAATCTGATTCGCATAAGAGAGCTGGGAGTGAAGAAAGTGGTGGTGGGTGCTCTGCAACCCATTGGATGTCTTCCCCAGATCACAGCCTCAACCTCATTCCAACGTTGCAATGAAACCCCCAACGCCCTCGTGCTTCTCCACAATACACTCTTGAACGAAGCAGTGACCATGTTAAACCAACAAACCAAGGAGAGTTCCACGTTCCGAATTCTTAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACACACAACATTCGGGACAGGTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAACTACTCGTGCGGGAGTGTGGAAAACAATGTTAAGAAATATAGGGTATGCGATGATCCCAAATCTGCTTTCTTTTGGGATTTTGTGCACCCTACACAAGCTGGATGGCATGCAGTATACAACAAGTTGCGAACCATGAATGATCTTCAACGGATTCTTTACTAG 1059 0.4514 MNFNKQLFLLLNLFSVLFLSGERVLQAEAGHHHHHHHHHGPTKLFVFGDSYADTGNIQRAVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTLVPLPNMTNQIDFLQQLIKDKVYSALDLTNSVALVSVAGNDYSHFLQTNGSEGIASFVASVINQTTMNLIRIRELGVKKVVVGALQPIGCLPQITASTSFQRCNETPNALVLLHNTLLNEAVTMLNQQTKESSTFRILNLFDSFMSVLNHPSTHNIRDRLKPCCVGVSSNYSCGSVENNVKKYRVCDDPKSAFFWDFVHPTQAGWHAVYNKLRTMNDLQRILY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0531 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 352 - -
Vra3g0531 352 SUPERFAMILY SGNH hydrolase 40 341 - -
Vra3g0531 352 Pfam GDSL-like Lipase/Acylhydrolase 44 340 IPR001087 GO:0016788
Vra3g0531 352 Gene3D SGNH hydrolase 29 347 IPR036514 -
Vra3g0531 352 CDD SGNH_plant_lipase_like 44 341 IPR035669 -
Vra3g0531 352 PANTHER OSJNBB0059K02.9 PROTEIN 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0531 Vra-Chr3 5986947 5989680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0531 3 337 Pollen Coat Proteome AT1G75930 26.039 1.56e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0531 - - vun:114165063 652.514