Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0529 ATGGATGCTGAATCGGAGAAGCGGGCATTCACCTCCACTTCTGTTTCTAGGTCCTCTTCCTTTGAAGGTATGGATCGGCTTGTTGACAAGGAGGAGATGGAAGCGGCCGAGACTCTCGCACAGTTGGCAATGCGTGATTCTCACTCTACTGACAAATGGTGCACTAAACTATGTGCCATTCCTGAAGTTCATCCTTCACCGACTCTTCACTCTGATCCCTCTCTTGGGACTGCGGACCAAGCTATTGCAGATCAGCAGCAAGATGAAAAAGTACACGCTACTGCATCTGTAGAAGCAGAGAGGACTCAGCAGAATAACTGTTCCGAACCCATGGAGGTAGAGCAGGATGCCAATTTAATACCTAACTCAAGTCATACGGAGGTGGAACAGGAAGCCAATTTAATACATAACTCAAGTCATACCGAGGTGGAACAGGATGCCAATTTAATACATAACTCCAGTCATACCGAGGTGGAACAGGATGCCAATTTAATACATAACTCGAGTCATACGGAGGTGGAGGTGGAGCAGGCGCAGGATTCCAATGTAGCACATAAACCAAAGGAGCAGGATTCCAATGTAACACATAAATCAAATAACCTTTTAGGTCGTTATAACAGGTCAAGGAAAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATGCGCAGGATATTGGCAAATAGAGAGTCAGCCAGACAGACAATTCGACGTAGGCAGGCTCTGTGTGAGGAATTAACAAAAAAAGCTGCCACTTTGGTGGTGGAGAATGAAAGTCTAAAGAAGGAGAAAGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAAATCGCCAAGTCAACAAACACTGAAGAAGAGAAAACTCCCGTTGAGCCCGAGTCATCTGTGGCTGAGGTAACACCATCGTCTGGTAGTGGTCCATGGTTCCTTTATAACCATTTTCCAGTTCAACATGTATTTTGGCCTTCGCCCCTTCAGCCCACTTATCCAGTTCATTTACCAAATGCATCATTTAATTCCATCATCATTCCATCTATTGCTAATGTTCCTTGTTCTTCCGAGTCTGAATTATATCACAAGCAAAATAACCTTATAAATGATAAGCAAACACCAAATCCATATTACATGTTTCCATGCCCTTGGATATTCCCATGTCCGCAGTTTGGAAATGGACAATCATCACCTTCTTGTAGCCTGAAAGATAAACAAGATAATCTTTCTCTAGGCAAACCCTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCGAGCCTGGACAGAAGCCAGACTCGGTAATGACCCTTCAAGATTTTCATTGGATGGAGGTGAGAAGAAAACAGAATGTCACATCATAGAAAATAATCATGGACCCTCTCTTGGTTGTAATGGTCATGCTTGCGCTTTCGAACAAGAAAACGAGCTTCAATTACATTCTGGTCCAAACAATAAAGCATCTTCAACGGCTTATATTGGAGCATCTTCAGTTGAAAAGAAACAAAAACAGTTCATTTGCCAGGGGAAAAGTCTAGCTGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACTAAGCAGAAAAGCATCCATAACCGCCAGTCTCGAATGCAGTGTTGA 1659 0.428 MDAESEKRAFTSTSVSRSSSFEGMDRLVDKEEMEAAETLAQLAMRDSHSTDKWCTKLCAIPEVHPSPTLHSDPSLGTADQAIADQQQDEKVHATASVEAERTQQNNCSEPMEVEQDANLIPNSSHTEVEQEANLIHNSSHTEVEQDANLIHNSSHTEVEQDANLIHNSSHTEVEVEQAQDSNVAHKPKEQDSNVTHKSNNLLGRYNRSRKNLTEEEKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKEKDLALKEYQSLETTNKYLKAQIAKSTNTEEEKTPVEPESSVAEVTPSSGSGPWFLYNHFPVQHVFWPSPLQPTYPVHLPNASFNSIIIPSIANVPCSSESELYHKQNNLINDKQTPNPYYMFPCPWIFPCPQFGNGQSSPSCSLKDKQDNLSLGKPCSSSSSLNTLANVDYRAWTEARLGNDPSRFSLDGGEKKTECHIIENNHGPSLGCNGHACAFEQENELQLHSGPNNKASSTAYIGASSVEKKQKQFICQGKSLADAVAAAEARKRRKELTKQKSIHNRQSRMQC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0529 552 SMART brlzneu 216 280 IPR004827 GO:0003700|GO:0006355
Vra3g0529 552 MobiDBLite consensus disorder prediction 84 112 - -
Vra3g0529 552 CDD bZIP_plant_GBF1 221 272 IPR045314 GO:0003700|GO:0006355
Vra3g0529 552 MobiDBLite consensus disorder prediction 97 112 - -
Vra3g0529 552 Pfam bZIP transcription factor 216 278 IPR004827 GO:0003700|GO:0006355
Vra3g0529 552 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 281 IPR004827 GO:0003700|GO:0006355
Vra3g0529 552 MobiDBLite consensus disorder prediction 1 24 - -
Vra3g0529 552 MobiDBLite consensus disorder prediction 171 217 - -
Vra3g0529 552 MobiDBLite consensus disorder prediction 179 193 - -
Vra3g0529 552 MobiDBLite consensus disorder prediction 533 552 - -
Vra3g0529 552 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 13 547 - -
Vra3g0529 552 MobiDBLite consensus disorder prediction 287 307 - -
Vra3g0529 552 Coils Coil 527 547 - -
Vra3g0529 552 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 547 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vra3g0529 552 SUPERFAMILY Leucine zipper domain 220 275 IPR046347 GO:0003700|GO:0006355
Vra3g0529 552 Coils Coil 202 277 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0529 206 552 bZIP Transcription Factor Family AT1G19490 36.827 8.27e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra3g0529 bZIP_1 4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0529 - - vra:106757437 1081.63