Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0526 ATGGGTTCATTCTCTGGCACTTCTGAAATAGTTGAGGCAAGGGAGGAGCTGAATACAAGGAAAGCTCCTGGGATTTATCAGTACAATTCTGAGTGTAGCACGTCTGAGAAAAGTCACAAACTTTCAGTGCTGAAACTGGGATGCAAGGATGATCTAGACGATGATATTAATAAGCTGTTTGAATCAATTGCTCTTAAGTCTTCGTCAAGGGATTTGGGTCTCTTACAAGACGGTGCAAGTCCTAGACTGAAAAGTGCGTTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCAAGAGTTGGAGCTGAGTCTGTTAATTTAAAGCAAGCATTAAGAGACCTTTGCATATCTAAGGCATCGGAAATGGCCGCTATGAAGCGATTATCAAAGTCAACAGCTTCTCCAAGAATATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAATCGGCCTGGGCCTTCCTCTGTTGAAAGCAAGGAGCGTCAAATTGAAGTAGCTCTTGTACCTGAAAAAAGTAAGTCCCTTACATTGGTGAAGACCTCTCAATCTTATCAAGCTGCCCAAATCGCATCGTCGAGCCGAAACATTCATTCGTCTCGGCAAGTTGCTGTTGCCACCACTCAGTATGATTCTGGGACTTCATTGGCACAAAGTGATATGGCATGCCCATCAAGTAAAGTTGGAATTCAGTCACAAAGAGTGGTACCTGTTGAATTAGAAGAACAAGCATCTGCCTCTTCATCTTCTATTCCTAATACAATTGGAAGCAAGCTAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGTAATAAAGCATTTGGGTCAAATAACGGGAAGAAAGGTAGACTGCAAACTGAATCTTCATCTACTTCTGCAAATGGCAACAGAGTTAACAAACTGCCACGCCATGCCCCCCGCACTGTTAAATCGGTCATCAAGAACAAGAATCTGACTAAGAAGAAACCAAAGGAGGATTCGGGTTCTGCTTTATGTGGTCCTACGCCCAATGCAGTTAAGAAGCCAGTTCCTGGTACCCCTCGGCTAATTTGTGAGAGATGTAGATGTGCTTTAGAAAATACAAGTGAAGAAAAAAACCAAGATCCTGTGCCATTGGACTCTACCAGTCCTGGAAATGGAGTAAACACGAGTAATGTACACTCCAGCTTAAATAAACCTGGTTTGGTGTTAACTGGCGTTAATAAAAGCAAAACAGTTGCAAAAGTCAAGAACTCCAAGTTGAAAGAGCAACTTGAATTTTCGCAAAGCTCTAAAAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTAAGTGGCTCAAGTCGTAGCACTAGGCCTCACATGTCAAAAGATGTCAGATGGGAAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGAGCTTGAGAAACTTCAATCTCTTGAAGAAGCTTGGTTGTGGGGACATTGGGACTGTATATCTTGCGGAACTAATTGGCACAAGCTGCTTGTTTGCTATCAAGGTCATGGACAATGAATTTTTGGAAAGGAGAAAGAAAATGCCCAGGGCTCAAACTGAAAGAGAAATACTAAGGATCCTGGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTCATCATGGAGTATTGTCCAGGAGGAGATCTTCATGTTCTACGGCAGAAGCAACTTGGTAGATGTTTTTCAGAGCCAGCAGCAAGGTTCTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCGGAAAACATTCTTGTTCGGGAAGATGGTCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAACACTTCTGAAATCTTCATCTGATGTCGACCCTGCAAAAATTTCTGGTCTAAGTGTGCAATCAAGTTGCATTGAACCATTCTGCATCGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTACTACCTGCGGCTGCAAAAACAAGGAAATTAAAAGCTGATCCTTCTGCCCAGGTCAGATCATTGCCACAGCTGGTGGCCGAGCCCACTGATGCAAGATCAAACTCCTTTGTTGGTACACATGAATACTTGGCTCCCGAGATCATCAAAGAAGAGGGACATGGAGCTGCGGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTGGCCAACGTAGTGATGCAGAGTCTTAGATTCCCTGACCACCCATTTGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTATTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATCAAACAACACCCTTTCTTTGAAGGCCTTAACTGGGCCTTAATTCGGTGCGCGGTCCCTCCAGAACTTCCAGACTATTATGATTATGGAGTTTCAGACATGATTAACTCACAGGTTAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA 2610 0.4295 MGSFSGTSEIVEAREELNTRKAPGIYQYNSECSTSEKSHKLSVLKLGCKDDLDDDINKLFESIALKSSSRDLGLLQDGASPRLKSALKKPITMGVPRSPRVGAESVNLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAETNRPGPSSVESKERQIEVALVPEKSKSLTLVKTSQSYQAAQIASSSRNIHSSRQVAVATTQYDSGTSLAQSDMACPSSKVGIQSQRVVPVELEEQASASSSSIPNTIGSKLEVPKNASSPKKLGNKAFGSNNGKKGRLQTESSSTSANGNRVNKLPRHAPRTVKSVIKNKNLTKKKPKEDSGSALCGPTPNAVKKPVPGTPRLICERCRCALENTSEEKNQDPVPLDSTSPGNGVNTSNVHSSLNKPGLVLTGVNKSKTVAKVKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWEAIRHAQMQHGVLSLRNFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLIMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKISGLSVQSSCIEPFCIEPSCQVPCFSPRLLPAAAKTRKLKADPSAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVMQSLRFPDHPFVSFQAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDYYDYGVSDMINSQVKGAKYLECKVGERVEFELF* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0526 869 ProSiteProfiles Protein kinase domain profile. 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0526 869 MobiDBLite consensus disorder prediction 311 325 - -
Vra3g0526 869 Gene3D Transferase(Phosphotransferase) domain 1 566 634 - -
Vra3g0526 869 SMART serkin_6 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0526 869 MobiDBLite consensus disorder prediction 247 354 - -
Vra3g0526 869 Pfam Protein kinase domain 715 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0526 869 Pfam Protein kinase domain 487 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0526 869 Gene3D Transferase(Phosphotransferase) domain 1 711 832 - -
Vra3g0526 869 Gene3D Phosphorylase Kinase; domain 1 484 565 - -
Vra3g0526 869 MobiDBLite consensus disorder prediction 369 404 - -
Vra3g0526 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Vra3g0526 869 SUPERFAMILY Protein kinase-like (PK-like) 459 844 IPR011009 -
Vra3g0526 869 MobiDBLite consensus disorder prediction 422 463 - -
Vra3g0526 869 CDD STKc_phototropin_like 486 836 - -
Vra3g0526 869 MobiDBLite consensus disorder prediction 248 267 - -
Vra3g0526 869 MobiDBLite consensus disorder prediction 371 404 - -
Vra3g0526 869 PANTHER FLIPPASE KINASE 1-RELATED 1 869 - -
Vra3g0526 869 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 869 - -
Vra3g0526 869 MobiDBLite consensus disorder prediction 424 459 - -
Vra3g0526 869 MobiDBLite consensus disorder prediction 286 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0526 Vra-Chr3 5930846 5936318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0526 1 869 AGC Kinase Gene Family AT2G36350 50.522 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vra3g0526 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0526 - K08286 gmx:100792120 1448.34