Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0519 ATGGTTCAGAAGTACTTGTTGCACGAGCTACTTCAGGAGGATCAAGAGCCCTTTCTTCTAAACAAGTACATTTCCGATAGGCGAAGCCAGATGAAACGGCCTTCCTCTAATACCTCTTTGCAAGTTAAGAAACACAAATCAACCAATCCAACCCCAAGCTTCCCGGGGAATTTCTGCAAAAGTGCTTGTCTTTTTTCCCTCACAGACACCCCAGATTTCACAAAATCTCCACTCTTCGAATTCGCTTCCGCAGCAAAAAGCCCCTGCAAATCCCCCAACGCTATTTTCCTTCACATCCCTTCCCGAACCGCGTCTCTGCTTCTGGAAGCCGCTGTTAGGATCCAGAAACACTCCTCACCCGCTTCACGGCCCAAAGTGAAACCCCACTCCTTCGGTCTCTTCGGTTCCCTCTACAAGAGACTCACGCAACGGGGCCAGAAAAAGCGCCAGACAGAGGGTGGTGGAAGCGTCAAGGTCTCGGTCAAGGACATTCTGAAGTGGGATTCCTCTGTTGGGCGAAAAAAAGGTTCCAACAAGAAAGAGGATGAAGAAACTGTGAATGTGAATGCGAATGCGAATGCGTGTGAAGTGGGGTTTGTGTGTTCTTACAATGGTAGAACTAGTAGTGCTGTTTGGTCGGAGACCAACGAGGATAAATCCCTCAACATGGAAACGTCTAGTAGCGGCTACTCCGACGAGATTCACTTCATAACCAATTACACAAACTCCACCTGCTTCTGCGAAAGTCCGTTCCGTTTTGTTCTTCAAACTAGTTCTCCATCCTCCGGCCGCCACACGCCGGAGCTTACCTCGCCAAGTCGCCACGCAACTGAGGAGAAAGAAAGTAATGAAGGCGAGAGTGTGAAGAAGTTCGAATCAGGGGAAGAAGAGGAGGAAGACAAGGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCGTTCGAGGACGATGACGAAGGGCATGGAAACGGTGATGAAGGAGAAGAGGGTGGTTTTGATTTGGAGCGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTGGATCCGGTAGAACTTGAGAGAAGAATGCATGATGAAGAAGATGAGGAGGAGGATGAATCATTCATGAAGGAAACATTACGTAAAGAAAATGACTATAGAGAGGTGATTTTGAAAGGTGTGTGGCAGTCAAGGGTGTATGACAGACAGCAAATCCCAGATGAGTTTAAGAAGTTGGTATCTGATCTGATTATGGAAGAAGAGAGAGGACTTGATGAGTTGGAAGATAGAGATATGGTGATAACAAGGATATGCAAGAGGTTGGAATTGTGGAAAGAAGTGGAGTCGAACACAATTGATATGATGATAGAAGATGACTTCTCTAGGGAGGATGGTGAGTGGAAGGAAAATGTGGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGTGTGCTATCTTCGGCTTTCTGCTGGAGGAATTTTCAGAGGAACTAGTATGCTAA 1521 0.4688 MVQKYLLHELLQEDQEPFLLNKYISDRRSQMKRPSSNTSLQVKKHKSTNPTPSFPGNFCKSACLFSLTDTPDFTKSPLFEFASAAKSPCKSPNAIFLHIPSRTASLLLEAAVRIQKHSSPASRPKVKPHSFGLFGSLYKRLTQRGQKKRQTEGGGSVKVSVKDILKWDSSVGRKKGSNKKEDEETVNVNANANACEVGFVCSYNGRTSSAVWSETNEDKSLNMETSSSGYSDEIHFITNYTNSTCFCESPFRFVLQTSSPSSGRHTPELTSPSRHATEEKESNEGESVKKFESGEEEEEDKEQCSPVCVLDPPFEDDDEGHGNGDEGEEGGFDLERSYAIVQRAKQQLLYKLRRFEKLAELDPVELERRMHDEEDEEEDESFMKETLRKENDYREVILKGVWQSRVYDRQQIPDEFKKLVSDLIMEEERGLDELEDRDMVITRICKRLELWKEVESNTIDMMIEDDFSREDGEWKENVEQIRNMAGELECAIFGFLLEEFSEELVC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0519 506 MobiDBLite consensus disorder prediction 257 331 - -
Vra3g0519 506 MobiDBLite consensus disorder prediction 30 51 - -
Vra3g0519 506 MobiDBLite consensus disorder prediction 29 51 - -
Vra3g0519 506 MobiDBLite consensus disorder prediction 271 296 - -
Vra3g0519 506 PANTHER OS04G0572500 PROTEIN 1 506 - -
Vra3g0519 506 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0519 Vra-Chr3 5835498 5838840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0519 1 315 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.917 1.40e-58 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0519 - - gmx:100790018 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0519 3 5835498 5838840 Vra3g0519 3 5835498 5838840 ECH