Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0496 ATGGTGCCCCTTTTCCCTTATTTGTTTACATCTTCCATATGTTTAATTGTTAATCTACACACCAATAAAGTTAGTCGNATACTTGGAAAGGTGGAGAATAATGATAGGTTCTTAAGAATAGCTTTATATCAAGGTGATCGGAGTAGAAAAAGAGTAAGAAAGATTCCTTCAGCAGCTGCAAATGTTAATGAGAGTAAGGAGCCTTTGACAGATCCCACTCTCCTGTGTTGTGCCTTTAAAAAGCACAGGATATATTTATTCAGTCGAAGAGAACCGGAGGAGCCTGAAGATGCAACTAAAGGAAGAGATGTGTTCAATGAAAAACCTCCTGCTGATGAACTTTTGGCANTTTCAGACATTGGAAAGTCAGTTACAACGTCACTTCCTGACAATGTGAAGGTTCTCTATATTACCACTTGGCGACGAAATCATCTTCACATGAATCGGAACAGGGTCAAGATTATTGAAACATGCCTTGTATCCATTTTAACGTCAGTGATTTCGTTTGGCTTGCCACCTCTAAGAAAATGTANTCNTTGTCCTGAATCTGATCCTGCATCTGGTANTGAATGTCCTCGACCTCCTGGAATGTATTGGAATTATGTAAATCAAGCTCGTGATGCAAATGAGTCAGAGTCTCCTTTGGGTACAAGACAATGA 660 0.3909 MVPLFPYLFTSSICLIVNLHTNKVSRILGKVENNDRFLRIALYQGDRSRKRVRKIPSAAANVNESKEPLTDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPADELLAXSDIGKSVTTSLPDNVKVLYITTWRRNHLHMNRNRVKIIETCLVSILTSVISFGLPPLRKCXXCPESDPASGXECPRPPGMYWNYVNQARDANESESPLGTRQ* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0496 219 PANTHER WD40 REPEAT PROTEIN 15 135 - -
Vra3g0496 219 PANTHER OS08G0557500 PROTEIN 15 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0496 Vra-Chr3 5601259 5605136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0496 97 203 Ion Channels AT5G26240 55.046 5.97e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0496 K12736 - vra:106756727 384.415