Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0492 ATGGAACCCAATGCATTAGGGGGTGGAATATTTCCTAACATAAGTAGTGGTTTGATAGGAGTAGAAAACCTTCAAAACCAGCAAAACCCTCCACACCCTTTGCACCACCCCCAAATGGTTTCCTATGCTTCTCACCATGACACTGACACACATCAGCAACACCCACCTCAATCAATCAAACATGGCTACAACTATTCCGCGGGGAAAACCAACAAGTTACAAATCACACTCAGTGATGAAGATGAGCCCGGGTTCACGGCAGAAGACTCCGGTGATCCCAAGAGAAAAATGTCTCCATGGCATAGAATGAAGTGGACTGACACCATGGTAAGGCTCTTAATAATGGCTGTTTATTACATTGGAGACGAGGCTGGTTCAGAAGGCGCTGATCCCACTAAGAAGAAAGCCACGGGGTTGCTGCAGAAGAAAGGGAAATGGAAATCGGTGTCAAGGGGCATGATGGAAAAGGGGTACTATGTGTCTCCCCAACAATGCGAAGACAAATTCAACGACTTGAACAAGAGGTACAAGAGGGTCAACGACATTCTGGGCAAGGGCACAGCTTGTCGGGTGGTGGAGAACCAAACATTGTTGGACACCATGGATCTGTCCCCAAAAATGAAGGAGGAAGTTCGAAAACTGCTCAACTCCAAGCACTTGTTCTTCAGGGAAATGTGTACCTACCACAACAGTTGTGGCCACAACAACAACTGTGGCACTTCGAACGTGCAACAATCAAGTGAGGCTCAACCACAACATCAGCATCAACATCAACAGCAGCGGTGTTTGCATTCATCGGAGAACGGGGTGGGGGGTCTGAGAATGTTGAAAGAGGATGAGGACGAGGATATTGAGGAGGAGGATTCGGAGGATTTTTCTGATGAGGAGGAAGAGGAATCGGGAGAAGGAGCGTCAAGGGGTATGGATGAGGATGAGAATGATGTGATGAGGAAGAGAGCGAGAAAAGGAGGGTTTGGTGGGTTGTCATCATCATCATCGATATCATCACAGGCGATGATGCAGCAATTGAATGGGGAAGTGAGCGGTGTGTTGCAAGATGTGGGGAAGAGTGCATGGGAGAAAAAGCATTGGATGAAGAAGAGGGTGGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAGGCGTTTGAATTGGAAAAGCAACGGTTGAAGTGGGCGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGATAAGCTTCAGAATGAACGGAGGAGGCTGGAAATAGAGAGAATGGTCTTGCTAATTCGCCAGAAGGAGCTTGAATTGGTTAATGTTCATCAACAGCATCAGCATCAGCAGCAGCATTCTTCTACCTAG 1347 0.4759 MEPNALGGGIFPNISSGLIGVENLQNQQNPPHPLHHPQMVSYASHHDTDTHQQHPPQSIKHGYNYSAGKTNKLQITLSDEDEPGFTAEDSGDPKRKMSPWHRMKWTDTMVRLLIMAVYYIGDEAGSEGADPTKKKATGLLQKKGKWKSVSRGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCTYHNSCGHNNNCGTSNVQQSSEAQPQHQHQHQQQRCLHSSENGVGGLRMLKEDEDEDIEEEDSEDFSDEEEEESGEGASRGMDEDENDVMRKRARKGGFGGLSSSSSISSQAMMQQLNGEVSGVLQDVGKSAWEKKHWMKKRVVQLEEQQVSYQMQAFELEKQRLKWARFSSKKEREMERDKLQNERRRLEIERMVLLIRQKELELVNVHQQHQHQQQHSST* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0492 448 PANTHER F16F4.11 PROTEIN-RELATED 1 448 - -
Vra3g0492 448 MobiDBLite consensus disorder prediction 77 97 - -
Vra3g0492 448 Coils Coil 369 389 - -
Vra3g0492 448 MobiDBLite consensus disorder prediction 279 305 - -
Vra3g0492 448 Gene3D - 105 178 - -
Vra3g0492 448 Pfam Myb/SANT-like DNA-binding domain 102 226 IPR044822 -
Vra3g0492 448 MobiDBLite consensus disorder prediction 241 313 - -
Vra3g0492 448 MobiDBLite consensus disorder prediction 241 266 - -
Vra3g0492 448 MobiDBLite consensus disorder prediction 44 64 - -
Vra3g0492 448 Coils Coil 399 426 - -
Vra3g0492 448 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0492 Vra-Chr3 5572359 5574334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra3g0492 Myb_DNA-bind_4 1.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0492 - - gmx:100808934 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0492 3 5572359 5574334 Vra3g0492 3 5572359 5574334 ECH