Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0444 ATGGTGGTTGGAGAGTTCGCAGGTGGTTGTTTGAGAGAAATGAAGAACTTGAGCTGTCGTGTTATCGCTGGGCGTTGGTTCATGTTGTATGCATCTTTGCTTATCATGGCTGCTGCAGGTTCAGTTTATATGTTTGGCATGTACTCTAACGAGGTCAAAACCTCTTTGGGGTATGACCAAACCACTCTCAACTTGCTCGGCTTCTTTAAAGACATGGGTGGCACACTTGGAATCATATCGGGGTTGATCAACGAGGTAACACCACCCTGGTTGGTACTCTCAATAGGGGTTCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCAAAACCCCAACTTTGGCAAATATGTCTCTACACTTTCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTGGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGTAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGAGCAATCATCGCTCAGTTCTACCATGCCTTCTATGGTGATCACAACCCTCAAGCTCTTATCTTACTCATTGCGTGGCTTCCTCCTGCTGTTAACTTCCTTTTCCTTCCAACAATTCGGATATTCAACAACGTTTACTATCACCGTCCCAACGAGAACAAGGTTTTCTATCACCTTCTATGGATTTCACTTGCCCTTGCTGGGTTTCTCATGGTTTTGATCATAATGCAAAGCAAGCTCACTTTTACAAGGCCAGAATTCGTAGCCGATGGGGTTGTGGTTCTTTTCCTTCTTCTTCTCCCACTTGTTGTGGTATTCAGAGAGGAAATAAAGCAATTGAAAGCCAAAACTCAAGGTGTGACCGACTCAACCTCCCAGTCGAAAGTAGTCACTGAAATTATTCCACCTCCAAACGTGGAGCAAGAAGTACCAGCAACAACAGGTTCGCTCGAGAAAAGTTCTTGTTTCAGGAACATACTCAACCCCCCAAAGAGGGGAGAAGACTACACCATTCTGCAAGCACTTTTCAGTATTGACATGCTGATTCTGTTCGCTGCAACAATATTTGGTGCTGGCGGAGCATTAACAGCCATAGACAATCTAGGACAGATTGGAAGGTCATTGGGATACCCGAGGAAGAGCATCACGACATTCGTGTCCTTGTTAAGCATATGGAACTATTTGGGACGGGTAGTTGCAGGTTTTGCCTCTGAGATCTTGTTGATCAAATACAAAATCCCTCGTCCCTTTATGCTCACTGTTGTTATGCTTCTCTCTTGTGTTGGCCATATTCTGATTGCCCTTGGTGCCCCAAATTTCCTCTACTTCGCTTCCGTCGTTATAGGGTTCTGTTTGGGAGCTCAGTGGCCGCTAATGTTTGCGATCATATCAGAAATATTTGGCCTTAAACATTACTCCACGTTGTGCAACTTTGGAGCCGTGGCAAGCCCTGTTGGATCTTACATTTTAAACGTGAGACTGACAGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCTCGAGACAAGCGGGGAAGGAGCTTAACTGCGTTGGAGTGCAGTGCTACAGAATGGCGTTTGTAATAATCACGGCGGCGACGCTGTTTGCCTGCTTTATATCGTTTGTTTTGGTGCTGAGAACTAGAAAATTTTACAAAGGGGATATCTATAGAAACTTCAGAGTGGAACATGTAACCCAAGAGAATGGTATGTTAGCAACTGAAGGACACGGAAGTGCATTAGGAGAACAGGATAAGAAAAACAAAAATTGA 1788 0.4452 MVVGEFAGGCLREMKNLSCRVIAGRWFMLYASLLIMAAAGSVYMFGMYSNEVKTSLGYDQTTLNLLGFFKDMGGTLGIISGLINEVTPPWLVLSIGVLMNFFGYFMIWLAVSGRIAKPQLWQICLYTFIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIIAQFYHAFYGDHNPQALILLIAWLPPAVNFLFLPTIRIFNNVYYHRPNENKVFYHLLWISLALAGFLMVLIIMQSKLTFTRPEFVADGVVVLFLLLLPLVVVFREEIKQLKAKTQGVTDSTSQSKVVTEIIPPPNVEQEVPATTGSLEKSSCFRNILNPPKRGEDYTILQALFSIDMLILFAATIFGAGGALTAIDNLGQIGRSLGYPRKSITTFVSLLSIWNYLGRVVAGFASEILLIKYKIPRPFMLTVVMLLSCVGHILIALGAPNFLYFASVVIGFCLGAQWPLMFAIISEIFGLKHYSTLCNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLSRQAGKELNCVGVQCYRMAFVIITAATLFACFISFVLVLRTRKFYKGDIYRNFRVEHVTQENGMLATEGHGSALGEQDKKNKN* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0444 595 SUPERFAMILY MFS general substrate transporter 25 558 IPR036259 -
Vra3g0444 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 585 - -
Vra3g0444 595 PANTHER MFS TRANSPORTER 9 585 - -
Vra3g0444 595 CDD MFS_Mch1p_like 24 543 - -
Vra3g0444 595 Pfam Major Facilitator Superfamily 352 553 IPR011701 GO:0022857|GO:0055085
Vra3g0444 595 Pfam Nodulin-like 25 273 IPR010658 -
Vra3g0444 595 Gene3D MFS general substrate transporter like domains 339 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0444 Vra-Chr3 5153257 5155139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0444 13 593 Nodulin-like Gene Family AT2G39210 59.284 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0444 - - gmx:100798313 913.679