Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0431 ATGGGTAAAACATGTACAACTTGTTCTTGGGGACTGTGGATGGGAGGGGTTGGAGTACTGGTGCATGTGATGAGGAAACTACAATCCTCTTTCTCACGTTCAAAAGGGGTGAAGCATGGCCATTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCTGAGAGATTCTTCATTGAATTGGGGTATTTAGATCACCCTGACTTTGTCAAGTTGTTAGAGCAAGCTGAAGAAGAGTTTGGGTTCTCTCAGGTAGGAGCACTTGCAATTCCTTGCCAACCTGATGAACTCAAGAGAATCATTGGAAGGGAAAATAATAGGAACAAGGGCATTACCTGTTGGGTTAAAGGGATTACAGTTGCATGA 360 0.4417 MGKTCTTCSWGLWMGGVGVLVHVMRKLQSSFSRSKGVKHGHFVVIATQGWKPERFFIELGYLDHPDFVKLLEQAEEEFGFSQVGALAIPCQPDELKRIIGRENNRNKGITCWVKGITVA* 120
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0431 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 110 IPR003676 GO:0009733
Vra3g0431 119 PANTHER SMALL AUXIN-UP RNA-RELATED 13 110 - -
Vra3g0431 119 Pfam Auxin responsive protein 31 99 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra3g0431 Vra-Chr3 4981167 4981526 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0431 37 100 Calmodulin-binding Proteins AT4G34750 42.188 2.98e-11 55.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0431 - K14488 gmx:100795119 182.185