Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0397 ATGGCCGATGATTTCGAGTTCGCAGACAAAGTTCCTCCGTCGTTCGATCGAGTGGCCTCAAACCAAGGGCTCAACCCAGGCTTAATTGTGCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTCCTCGTTGGAAACTTTGTGCTCTACACTTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAAAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTGTCTGCACCTGGAGAGTAG 252 0.4802 MADDFEFADKVPPSFDRVASNQGLNPGLIVLLVVGGLLLTFLVGNFVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0397 83 MobiDBLite consensus disorder prediction 59 83 - -
Vra3g0397 83 PANTHER DNA-BINDING PROTEIN S1FA2 3 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vra3g0397 83 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 83 - -
Vra3g0397 83 Pfam DNA binding protein S1FA 20 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vra3g0397 83 MobiDBLite consensus disorder prediction 59 73 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Vra3g0397 S1FA 2.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0397 - - gmx:100500059 113.62