Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0386 ATGGAGGCTACTTTACTCTTTCTCTCCTTTCTCACGTTTCTACTCTCATTCCCACTCTACTCACCTTTTTCTTCTGCTCAGATTATGCAAGGGTTTGTAAGTTTGGACTGTGGAGGTACAACAGAATTCACTGATGAAATTGGTCTTCAGTGGACTCCTGATAATAAGCTTACTTATGGACAAACAAGTATTATATCAGTTGCAAATGAGACACGGAAGCAATACACGACACTTAGACACTTTCCTGCTGATTCAAGGAAATACTGTTACACACTTGATGTTGTGAGTAGGACGAGGTATCTGCTCAGGGCCTCTTTCTTGTATGGGAACTTTGACAATAATAATGTTTATCCAAAATTTGACATTTCTGTTGGGGCTACACACTGGTCTACCATTGTTATATCGGATGCCAACAGCATAGAAATGCGAGAGCTTATATTTCTGGCTTCAAGTCCTACAGTGAGTGTTTGTTTATCAAATGCAACAACCGGACAACCATTCATCTCTACCCTTGAACTTCGCCAATTCAATGGTTCAGTTTATTATACACAATTTGAGGAACACTTTTACCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAATGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCGGATTCTGTAAAGAAAGCAAATTATCTTGTTGATGTAGCTGCTGGAACCGAAAAAATTTCTACAGAAGCACCAATTGATGTTAACAGAGATGAAATGCCACCGGTGAAAGTGATGCAGACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGATTAAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATCTGGGTCCCAATGAGTCCAGAAAATTCAGGCTAGTACTTCCAGGCCAGCCTGATGTTAGTAAGGCAGTTGTAAATATTGAAGAAAACGCTCAAGGGAAATATCGTCTTTATGAACCGGGATTTACCAATATATCCCTACCTTTTGTGCTCTCTTTTAGATTTGGCAAGACATATGATTCCTCTAGGGGACCTCTCCTAAACGCCATGGAGATAAACATGTATTTGGAGAAAAATGATGGTTCTCTAGATGGAGCAACTATCTCCAGCGTACTTTCGCACTACTCTGAAGCAGACTGGGCCAAAGAAGGTGGTGATCCATGTCTACCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAACCAAGAATAGTCTCAATCTTGTTATCCAATAGAAACTTGACTGGCAATATTCCTTTGGATATCACCAAATTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTCCATTACCTGATTTTATTGGGTGCTTGGACTTAAAGATCATTCATCTAGAAAACAATCAATTGACCGGTGTGCTCCCAACTTCTTTAGTGAACCTTCCAAACTTGAGGGAACTGTATGTGCAAAATAACTTGTTATCTGGAACAATACCATCAGATCTTCTTAGTAAGGATTTGGTTTTGAACTACTCTGGAAACCTCAATCTTCACAAAGAAAGCAAAATAAAGGGGCATATGTACGTAATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATTTCTTGCCTGTATATGCGCAAAGGCAAGAGAAAATATTATCAGCAAGACCGAGCTGATTCTCTCCCTGCTCAAAGGCTGGCTTCTTGGAAGAACGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCCGAAATTGAAAATGCTACAAATAACTTCGAGAAAAAAATTGGTGCCGGTGGTTTTGGAGTTGTCTACTATGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCGAATGAGGTAACTCTTCTTTCAAGAATACACCACAGAAATTTGGTACAGCTGCTTGGTTATTGTCGAGATGAAGAGAATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAAGAACATCTTTATGGTCCATTAGCCAATGGAAGAAGCATCAATTGGATTAAGCGTCTTGAGATTGCCGAAGATGCTGCCAAAGGTATTGAATATCTTCATACGGGTTGTGTTCCTGTCGTTATTCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAAAGCCAAGGTTTCTGATTTCGGTCTTTCAAAACTCGCTGTTGATGGAGTCTCACATGTTTCAAGCATAGTTCGGGGAACAGTAGGATATCTTGATCCTGAGTACTATATTTCCCAACAGCTGACAGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTCCTTGAACTAATGTCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTATAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATTGATCCCATGTTGCAGAATGATTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCTCATGGACATATGCGGCCATCAATTTCAGAAGTTCTAAAGGAGATCCAAGATGCCATATCTATTGAAAGACAGGCAGAAGCATTAAGAGAAGGGAACTCAGATGATATGTCCAAAAATTCTTTTCAGTCTTCCTTGAACATGGGTTCTATGGATCTAGTTGGAGCTGAGAGTTACTTGTCAATTGATGAATCAGTTGCACAGCCAACAGCAAGATAG 2793 0.3981 MEATLLFLSFLTFLLSFPLYSPFSSAQIMQGFVSLDCGGTTEFTDEIGLQWTPDNKLTYGQTSIISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDNNNVYPKFDISVGATHWSTIVISDANSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEHFYLSVSARINFGAENDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTEAPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPNESRKFRLVLPGQPDVSKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISSVLSHYSEADWAKEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNRNLTGNIPLDITKLVGLVELWLDGNMLTGPLPDFIGCLDLKIIHLENNQLTGVLPTSLVNLPNLRELYVQNNLLSGTIPSDLLSKDLVLNYSGNLNLHKESKIKGHMYVIIGSSVGASVLLLATVISCLYMRKGKRKYYQQDRADSLPAQRLASWKNDDPAEAAHCFSFSEIENATNNFEKKIGAGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLANGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELMSGQEAISNESFGINCRNIVQWAKLHIESGDIQGIIDPMLQNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERQAEALREGNSDDMSKNSFQSSLNMGSMDLVGAESYLSIDESVAQPTAR* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0386 930 PANTHER OS07G0107800 PROTEIN-RELATED 17 930 - -
Vra3g0386 930 Gene3D Phosphorylase Kinase; domain 1 578 677 - -
Vra3g0386 930 SUPERFAMILY L domain-like 403 519 - -
Vra3g0386 930 SUPERFAMILY Protein kinase-like (PK-like) 588 872 IPR011009 -
Vra3g0386 930 Pfam Malectin-like domain 35 364 IPR024788 -
Vra3g0386 930 ProSiteProfiles Protein kinase domain profile. 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0386 930 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Vra3g0386 930 Gene3D Transferase(Phosphotransferase) domain 1 678 901 - -
Vra3g0386 930 Pfam Protein tyrosine and serine/threonine kinase 604 808 IPR001245 GO:0004672|GO:0006468
Vra3g0386 930 PANTHER TYROSINE KINASE DOMAIN PROTEIN 17 930 - -
Vra3g0386 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Vra3g0386 930 SMART serkin_6 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0386 930 CDD STKc_IRAK 608 875 - -
Vra3g0386 930 Gene3D Ribonuclease Inhibitor 378 534 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0386 Vra-Chr3 4541406 4548423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0386 24 712 Receptor kinase-like Gene Family AT2G37050 69.684 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra3g0386 Malectin_like 1.2e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0386 - - gmx:100784017 1743.4