Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0384 ATGGCGGCAGCAGCAGCAAGGCCTCTCGTCTCCGTTCAAACCCTAGAAGGCGATGCAGCCCCCGCCGTCCCTCTTCCTGATGTCATGAAGGCTCCCATTCGCCCCGACATTGTTAATTTCGTCCACTCCAATATTTCTCGCAACAGCCGCCAGCCCTACGCGGTGAGCAAGCGCGCCGGCCACCAGACCTCCGCCGAGTCATGGGGAACGGGCCGTGCCGTGTCGCGTATCCCTCGCGTCCCCGGCGGCGGCACGCACCGTGCTGGCCAGGCCGCCTTCGGTAACATGTGCCGCGGCGGTCGTATGTTCGCACCGACCAAGATCTGGCGCCGCTGGCACCGCAAGATCAACGTTCAGCAGAAACGCCACGCCGTGGTCTCTGCCATCGCCGCCTCCGCGATCCCCTCCCTTGTCCAGGCCCGCGGCCACCGCATCGAGTCTGTCCCTGAGCTTCCCCTCGTCGTCAGCGACAGCATCGAGAGCGTGGAGAAGTCCAAAGAAGCTGTGAAAATTCTTCAGAAGATCGGTGCGTTCCCCGACGCGGAGAAGGCGAAACTGAGTCACGGAATTCGTCCCGGTAAGGGAAAGATGAGGAACCGTAGGTACATTTCACGCAAGGGTCCTCTTATCGTTTATGGATCTGAAGGTGCTAAAGTTGTCAAAGCGTTCAGGAACATTCCTGGCGTCGAGTTGGCAAATGTGGACAGGCTTAACCTTCTGAAGCTTGCACCCGGTGGCCACCTTGGGAGGTTTATTATTTGGACCAAGTCTGCGTTTGAGAAATTGGACTCCATTTATGGATCCTTCGACAAGGTCTCCGAGAAGAAAAAGGGCTACCTGCTTCCCCGCCCCAAGATGGTTAACTCGGACTTGGCCCGCATCATTAATTCCGATGAAGTTCAGTCCGTGGTGAGGCCCATCAATAAGGAGGTTAAGCGCGCCACTCTGAAGAAGAACCCTCTGAAGAACCTCAATGTCATGTTGAAGCTGAATCCCTATGCTAAGACTGCTAAAAGGATGGCTCTTCTCGCTGAGAAGCAGCGTCTTGTTGCTAAGAAAGAAAAGCTTGATCAGAAACGCAACATTGTTTCCAAGGAGGAGGCTTCTGCTATCAGAGCTGCTGGAAAAGCGTGGTATCAAACAATGGTGTCAGACTCTGATTATACAGAATTTGACAACTTTTCTAAGTGGTTGGGCGTGTCCCAGTGA 1209 0.5509 MAAAAARPLVSVQTLEGDAAPAVPLPDVMKAPIRPDIVNFVHSNISRNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKINVQQKRHAVVSAIAASAIPSLVQARGHRIESVPELPLVVSDSIESVEKSKEAVKILQKIGAFPDAEKAKLSHGIRPGKGKMRNRRYISRKGPLIVYGSEGAKVVKAFRNIPGVELANVDRLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKVSEKKKGYLLPRPKMVNSDLARIINSDEVQSVVRPINKEVKRATLKKNPLKNLNVMLKLNPYAKTAKRMALLAEKQRLVAKKEKLDQKRNIVSKEEASAIRAAGKAWYQTMVSDSDYTEFDNFSKWLGVSQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0384 402 Pfam Ribosomal protein L4/L1 family 23 263 IPR002136 GO:0003735|GO:0005840|GO:0006412
Vra3g0384 402 PANTHER 60S RIBOSOMAL PROTEIN L4 3 402 IPR045240 -
Vra3g0384 402 PANTHER BNAC03G35890D PROTEIN 3 402 - -
Vra3g0384 402 MobiDBLite consensus disorder prediction 51 70 - -
Vra3g0384 402 Coils Coil 339 366 - -
Vra3g0384 402 Gene3D - 4 305 IPR023574 GO:0003735|GO:0005840|GO:0006412
Vra3g0384 402 SUPERFAMILY Ribosomal protein L4 9 264 IPR023574 GO:0003735|GO:0005840|GO:0006412
Vra3g0384 402 MobiDBLite consensus disorder prediction 51 89 - -
Vra3g0384 402 Pfam 60S ribosomal protein L4 C-terminal domain 277 348 IPR025755 -
Vra3g0384 402 ProSitePatterns Ribosomal protein L1e signature. 117 143 IPR013000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0384 1 402 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 80.049 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0384 K02930 - gmx:100796712 748.043