Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0375 ATGGCAACTTCTGTGTTAAATGTTCGGCCTCCTGCATTAACTTCCGTATCTGAACCACTCCCATTTTTTTATGGAACCACAAGGTTGTACATTTGCTATCTGTGCCCTTATGCACAACGTGCATGGATAACTAGGAACTGCAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGACCTCAAAAATAGGCCTTCTTGGTATAAGGATAAAGTGTACCCTCTCAATAAGGTGCCATCGTTGGAGCACAATGGCAAGGTTTTAGGAGAAAGTCTTGATTTGATCAGATATATAGATGCCAACTTTGAAGGGCCATCTCTATTTCCAAGTGATCCTGCCAAGAGGGAATTTGGAGAGCAAATGATATCCCATGTTGATACGTTCACCAGTGGCGTATACTCTTCATATAAAGGAGATCATCCTGTACAACAAACCAGTGCTGCTTTTGATTACTTGGAGAAGGCTCTTGGTAAATTTGATGATGGACGATTCTTTCTTGGCCAATTTAGTTTGGTAAGTTGA 522 0.4138 MATSVLNVRPPALTSVSEPLPFFYGTTRLYICYLCPYAQRAWITRNCKGLQDKIELVPIDLKNRPSWYKDKVYPLNKVPSLEHNGKVLGESLDLIRYIDANFEGPSLFPSDPAKREFGEQMISHVDTFTSGVYSSYKGDHPVQQTSAAFDYLEKALGKFDDGRFFLGQFSLVS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0375 173 SUPERFAMILY Thioredoxin-like 24 107 IPR036249 -
Vra3g0375 173 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 172 IPR044629 GO:0004364
Vra3g0375 173 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 2 172 - -
Vra3g0375 173 SUPERFAMILY GST C-terminal domain-like 102 171 IPR036282 -
Vra3g0375 173 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Vra3g0375 173 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Vra3g0375 173 Gene3D Glutaredoxin 1 103 - -
Vra3g0375 173 Gene3D - 104 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0375 Vra-Chr3 4444872 4447603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0375 1 172 Glutathione S-transferase Gene Family AT5G02790 63.218 3.41e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0375 K00799 - gmx:100816962 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0375 3 4444872 4447603 Vra3g0375 3 4444872 4447603 ECH