Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0350 ATGAATGTTCTATCCAAGACTGCACTCAACAGGGGAATGAGTAACTATGTATTTGTTGTGTACTGTTATGTTTTTGCCTTTGTTGTCATGGCTCCTTTTGTAGTTTTCGTGGAGAAGAGAGTGAAGCTGAAGATGGCGTTCTCAATCTTCATGAAGATAATGATTCTCAGCCTGCTAGAGTCAGTTATTAGTCAAAATTTATACTTTTTGGGGATGAAATACAGCACAGCAGCCTTTGCTGTTTCCATGTACAATATTCTCCCGACCATTACCTTTGTCATGGCTTGGATTCTTAGGCTTGAGAAGATAAAATTAAAAAGCACACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCAACTGTTGCAGGTGCCATGATCATGACACTGATAAAGGGTCCAATACTTGATCTTTTTGGAACACACGCTAACAATACAAACAACCTGCAAAATGGTGGGGTAAATCTTGAACATGCAATAAAGGGATCAGTGATGATCATAATTAGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCTTACCCTGCCGAGCTCTCTCTTACAGCATGGATATGCTTATTGGGAACGGTTGAAGGTGGCATAGTGGCACTGGTTATGGAAAGGAATAACTTTTCAGCTTGGTCTCTGAAATGGGACACGAAATTGTTTGTTGCTGTCTACAGTGGCATAGTTTGCTCAGGATTAGCTTATTACATCCAAGGAGTGATGATGAAAGATAGAGGTCCGGTCTTTGTGACTACTTTTAACCCTCTCTGCATGGTCATTGTGACTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTGCCTTGGAAGGGCAATTGATGCTATCGTGATTATTGTAGGACTGTATATGGTGGTGTGGGGGTAA 906 0.4139 MNVLSKTALNRGMSNYVFVVYCYVFAFVVMAPFVVFVEKRVKLKMAFSIFMKIMILSLLESVISQNLYFLGMKYSTAAFAVSMYNILPTITFVMAWILRLEKIKLKSTRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHANNTNNLQNGGVNLEHAIKGSVMIIISCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLKWDTKLFVAVYSGIVCSGLAYYIQGVMMKDRGPVFVTTFNPLCMVIVTIMGSFFLAEQMCLGRAIDAIVIIVGLYMVVWG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0350 301 PANTHER WAT1-RELATED PROTEIN 1 301 - -
Vra3g0350 301 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 129 - -
Vra3g0350 301 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 301 - -
Vra3g0350 301 PANTHER WAT1-RELATED PROTEIN 1 301 IPR030184 GO:0016021|GO:0022857
Vra3g0350 301 Pfam EamA-like transporter family 3 127 IPR000620 GO:0016020|GO:0016021
Vra3g0350 301 Pfam EamA-like transporter family 160 299 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0350 Vra-Chr3 4208101 4210209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0350 1 301 Nodulin-like Gene Family AT2G37460 63.123 3.11e-139 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0350 - - vra:106757634 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0350 3 4208101 4210209 Vra8g0974 8 21879586 21882808 PCT