Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0349 ATGGCTTGTTGTCAAGAAAAACTGTTTCACAGACTGAAGCCATTCATAGGTGTAGTTTTCTTGCAGTTTGGATATTCTGGTATGGATGTGCTATCCAAGGCTGCACTCAACAGGGGAATGAGTAACTATGTATTTGTTGTGTACCGTCATGCTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGTGTTCTTAGAGAAGAAAGTGAGACCGAAGATGACGCTTTCAATCTTCATGAAGATAGTGATTCTCAGCCTGCTAGAGCCAGTTATTGACCAAAATTTATACTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTTCTCCCTGCCATTACCTTTGTCATGGCTTGGATTCTCAGGCTTGAGAAGATAAAATTAAAAAGCACACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCAACTGTTGCAGGTGCCATGATCATGACACTGATAAAGGGTCCAATACTCGATCTTTTTGGAACACACGCCACCAATACAAACAACGTGCAAAATGGTGGGATTAATCTTGAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCTTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCTTATTGGGAACGGTTGAAGGTGGCATAGTGGCACTAGTTATGGAAAGGAATAACTTTTCAGCCTGGTCTCTGAAATGGGATACGAAATTGCTTGCTGCTGTCTACAGTGGGATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTGGTGATGAAAGATAGAGGTCCGGTCTTTGTGACTACTTTTAACCCTCTATGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTACCTTGGAAGGGCAATTGGTGCTATTGTGATTATTGTAGGACTGTATCTGGTGGTGTGGGGTAAAAGCAAAGACTACGAATCATCAAGTACAATTACTGAAGAGAATATGTTGTCAGCCAAGCAAACAGTAGAAAAGACCAACAGCAAAGAAGAACATTTCAGTAACTTAGGCACCATAGCACGAGATGAACAAGTATGA 1122 0.4207 MACCQEKLFHRLKPFIGVVFLQFGYSGMDVLSKAALNRGMSNYVFVVYRHAFAFVVMAPFAVFLEKKVRPKMTLSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWILRLEKIKLKSTRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHATNTNNVQNGGINLEHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLKWDTKLLAAVYSGIVCSGMAYYIQGVVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAIGAIVIIVGLYLVVWGKSKDYESSSTITEENMLSAKQTVEKTNSKEEHFSNLGTIARDEQV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0349 373 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Vra3g0349 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Vra3g0349 373 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Vra3g0349 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
Vra3g0349 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Vra3g0349 373 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0349 Vra-Chr3 4165715 4168553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0349 4 363 Nodulin-like Gene Family AT2G37460 65.000 1.06e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0349 - - gmx:100777050 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0349 3 4165715 4168553 Vra3g0349 3 4165715 4168553 ECH