Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0328 ATGAATGGGGCGCAGAACAGAAAGGTTCACAATGTTGAAAAACCTTTTCCAGGATGCTTGGGAAGAATGGTGAACCTCTTTGATTTGACTGGGGGCGTCAATGGAAACAAGCTACTCACGGACAGGCCTCACCGCGATGCGTCATCACTTTCAAGAAGTCAATCAGATGTTGCAAGGATCGCAAGTCCTACTTTGGGTGACCAGATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTTTGTCAAATAAGAAAATAAATGGAACACCCATTAAGATGCTCATGGACCAAGAAATGTCCAAAGAAGTTGTTTCAAAGCACAACCCACCACCAAATGTAGTTGCAAAATTGATGGGGCTTGAAGCCCTCCCACGGGGAGATCCTAATTTATCCGTGGAGAAAAGCCATAGAGGAGATTATTCTCAACATATGTGTGATCATTCAGGGACACCATTTAAACACTGGCAGATGCATGATAGATTTATGGACAAGGAAATGCTTCATGAAGTTCATCTGAACACAGAACAGATTGCTTACAAGGATATTTATGACATATGGCTGCAATCACAAAGAACGGGCAATGTAAGAGACAAGACACCCGAGAGAGAAAAGTGGACTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGTCAAAAATTTATGGAAGCTAAACGTCTGTCCACAGATGAGAAACTACGTCAGTCCAAGGAGTTTGATGATGCCTTGGAAGTTTTGAGTTCAAATAATGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCCACTCCAGTAGCAGAGACAAAGCGCATTACTGTTCTTAAGCCTTCGAAGATGGTTGATAATGAAAAATCTGTTGGTAAGGGGAAGAAAAATGATAAGCAGATTAGGAAACCGGCAAATGTTGGTACTGCATGGGAGAGATACAGTCCTGGATACACTCCTCCCAATCAGAAAGTGGACGAGTTTCCAGTACAACCTACTCGTATAGTGGTATTGAAGCCAAGTCCGGGGAAGGCACATGAGATTAAGGCAGTGGTTTCCCCAACAATGTTGTCACCTCGGAATTTGCCAAGTGGAAATTTCTACCAGGAACCTGAAGATGATGATGTACTTGAATCAAGAAAAGTAGATAGTGAGATTACTCAGCAATTGCATGAAGATATGAGGAGCCATCAAAGAGATGAAACATTCTATTCTTCAGTATTTTCAAATGGCTATACTGGTGATGAGAGTTCATTCAACAAATCGGATCATGAGTGTAATGCAGGGAACTTTAGTGATTTGGAAGTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTTTTCTTCATCATCCTTCAGCCGTGCATCCTGCTCTCCTGAGTCGTCGGTATGCAGAGAGGCCAAGAAAAGACTTTCTGAAAGATGGGCCATGATGGCATCAAGTAAAGGCCTTCAAGAACAAAGGCACATGCGCAGAAGCTCTACCTTAGGGGAGATGCTTGCCCTCTCGGATATAAAGAAATCTGAAATATCCGAGCTTGAGGGTATTAATAAAGAACAGGAACCAAATGAATCTGTTTCTTGCAGTCGAAATTTTAATGCTGAAACATGTGTGGATGGTTCTCCTAGAAACCTCTCTAGGTCAAAATCTGTTCCAACATCTTCCACTGTGTTTGATAATGGTCTCAGTGTTGAAGTTTGTGATAATGATGCTGGCAAAATACATGTGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACCAGTTTCTTCTTCTCGAGGAGCAAGAAACCAACCAGAGAAAAATCTTGTCCATCTCAATCTAAAACTGAATCCCAATCTACACTCACTGGAGCATCAGATTCTCCAGTAGGTTCATCTGGTGTCCTTAGGGAGGATGTGTCTCAAAGCTTCAATAGTGGATCCATTGGAGAGTGTTCTCTTACAGCACCGTATGAATCATCAGGCAAAATGTTCTCAGATTCTATCTCTAATGGACAAGGCGCTATACCTCTGGAGTCTGGATTGACACTGTCAAAGCCCACGGTGCCGGGGATTTCAAGTGAAAACCAGGGTCAGCCGAGTCCGATATCAGTTTTAGAGCCTCCATTTGAAGATGATAATGGTGCTAACGAGGCCTTGGGCTATGTGAAGGGTGGTCACCTGGGATCACGGGGCCCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCACGGACCCTCTCATGGGATGATTCTTGTGTAGAGGTGGCAAGTCCATACCCATTAAAGCCCTCGTTGGGCTCCTTAGACACCAAGGTAGAGGATCAAGACTGGCTTGTGTTTGTCGAGAAACTACTATCAGCTGCTGGAATTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTCGAAAGCCCATTGGATCCATCATTGAGGGACAATTATGCAAATCTGAATGACAAGGAGCCTCAGCAACTCCATGAGGCGAAGCGAAGGCAGAGGAGATCCAATCAGAAGCTTGTATTCGATTGTGTTAATTTTTCACTGACAGAAATTACTGGTTATGGATCAGAGACTTACTTGATGGGTAGGTTATGGAGTGGGAGCCACAGCAGATTCCAAGTCCCCGAGGGTGAAGCTCACCCTTTGGTAGACCTTGTTGTGGCCCAGATGAAGGAGTTAATATCTGGTGCTATGAGGTCTGTTTGGGGAGATTGTGGGGACAGTAACAGCCTGGGGGTAGAAAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGGCATTAGAGATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTACAAGAACTTGTGGAGGATGCGGTAGTTGATTTGACTGGCAGGGCCTGA 2946 0.4358 MNGAQNRKVHNVEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARIASPTLGDQIEDKLIVSDSMRALSNKKINGTPIKMLMDQEMSKEVVSKHNPPPNVVAKLMGLEALPRGDPNLSVEKSHRGDYSQHMCDHSGTPFKHWQMHDRFMDKEMLHEVHLNTEQIAYKDIYDIWLQSQRTGNVRDKTPEREKWTEDVNGKKMALIRQKFMEAKRLSTDEKLRQSKEFDDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNEKSVGKGKKNDKQIRKPANVGTAWERYSPGYTPPNQKVDEFPVQPTRIVVLKPSPGKAHEIKAVVSPTMLSPRNLPSGNFYQEPEDDDVLESRKVDSEITQQLHEDMRSHQRDETFYSSVFSNGYTGDESSFNKSDHECNAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASSKGLQEQRHMRRSSTLGEMLALSDIKKSEISELEGINKEQEPNESVSCSRNFNAETCVDGSPRNLSRSKSVPTSSTVFDNGLSVEVCDNDAGKIHVSGELTKSKSMKSSFKGKVTSFFFSRSKKPTREKSCPSQSKTESQSTLTGASDSPVGSSGVLREDVSQSFNSGSIGECSLTAPYESSGKMFSDSISNGQGAIPLESGLTLSKPTVPGISSENQGQPSPISVLEPPFEDDNGANEALGYVKGGHLGSRGPLKSNLIDKSPPIESIARTLSWDDSCVEVASPYPLKPSLGSLDTKVEDQDWLVFVEKLLSAAGIDDQVQSDSFYSRWHSLESPLDPSLRDNYANLNDKEPQQLHEAKRRQRRSNQKLVFDCVNFSLTEITGYGSETYLMGRLWSGSHSRFQVPEGEAHPLVDLVVAQMKELISGAMRSVWGDCGDSNSLGVESVVRKEVVGKGWVELMALEMDILVKEVEGKLLQELVEDAVVDLTGRA* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0328 981 MobiDBLite consensus disorder prediction 621 645 - -
Vra3g0328 981 MobiDBLite consensus disorder prediction 613 645 - -
Vra3g0328 981 Pfam Domain of unknown function (DUF4378) 794 972 IPR025486 -
Vra3g0328 981 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 980 - -
Vra3g0328 981 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 980 - -
Vra3g0328 981 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0328 Vra-Chr3 3897135 3902410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0328 1 978 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.910 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0328 - - var:108322999 1917.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0328 3 3897135 3902410 Vra3g0328 3 3897135 3902410 ECH