Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0327 ATGGAGAACTTTTTTCGCCTAGTGGACCATGAAGACTTCTTCTCTCGTCGTTGCATTTGGGTGAACGGCCCTATAATCGTAGGGGCAGGTCCCTCAGGGCTTGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCCTTCATGGTTCTCGAACGTGCAGATTGCATAGCTTCTCTGTGGCAGAAACGAACCTATGACAGACTCAAGCTTCACCTCCCTAAGCAATTCTGCCAGCTTCCCAAGCTCCCTTTCCCTGAAGACTTCCCCGAATACCCCACAAAGAAGCAGTTCATAGAGTACCTAGAGTCCTACGCCACCCACTTCCAGATCAACCCTCAGTTCAACGAGTGTGTTCAGTCCGCAAGGTACGACGAGACAAGCGGATTGTGGCGGGTGAAGAGCGTTTCCTCCACTGGCGCCACACGCAACGAGGTGGAGTACATTTGCAGGTGGCTCGTGGTGGCCACTGGGGAGAATGCCGAGTGTGTGATGCCGGATATTGAAGGGTTGAGTGACTTCAAAGGTGAGGTCATCCATGCTTGTGATTACAAGTCAGGGGAAAGCTTCAGGGGAAAAAAGGTCCTTGTTGTTGGCTGTGGCAATTCCGGCATGGAGCTCTCTCTTGATCTTTGCAACCACCATGCTTCTCCTTCCATGGTTGTTCGCAGCTCGGTTCACGTGTTGCCCAGAGAAGTATTTGGGAAATCAACGTTTGAATTTGCGGTTATGATGCTGCAATGGCTGCCCCTTTGGCTAGTTGACAAGATTATCTTGATGTTGGCATGGTTTGTTTTTGGGAACGTGGAGAAGTTGGGGCTGAAAAGGCCTTCGACAGGTCCTTTGGAGCTGAAGAACACAAAGGGAAAGACCCCGGTTTTGGATCTTGGTGCCTTGGCCAAGATTAGATCCGGTGATATAAAAGTGGTGCCAGGAGTCAAGAGGTTCAATAATGGAGAAGCTGAGCTTGTCAATGGTGAAAAGCTCGATGTCGATGCAGTGGTGCTGGCAACCGGTTACCGCAGTAACGTGCCTTATTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATTCCCGAAGATGCCATTCCCTCACGGTTGGAAGGGAAATGCTGGACTTTATGCTGTGGGGTTCACGAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTAAAAATCGCTCAAGATATTGGCAAAGTTTGGAAAGACGAGACTAAGCAAAAGAAACAGCGCACTACTGCATGTCATAGAAGATGCATTTCTCAGTTCTAA 1272 0.4961 MENFFRLVDHEDFFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYATHFQINPQFNECVQSARYDETSGLWRVKSVSSTGATRNEVEYICRWLVVATGENAECVMPDIEGLSDFKGEVIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREVFGKSTFEFAVMMLQWLPLWLVDKIILMLAWFVFGNVEKLGLKRPSTGPLELKNTKGKTPVLDLGALAKIRSGDIKVVPGVKRFNNGEAELVNGEKLDVDAVVLATGYRSNVPYWLQEGEFFSKNGFPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGKVWKDETKQKKQRTTACHRRCISQF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0327 423 Gene3D - 24 407 IPR036188 -
Vra3g0327 423 Pfam Flavin-binding monooxygenase-like 26 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vra3g0327 423 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 15 421 - -
Vra3g0327 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 186 358 IPR036291 -
Vra3g0327 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 233 IPR036188 -
Vra3g0327 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Vra3g0327 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Vra3g0327 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Vra3g0327 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Vra3g0327 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0327 Vra-Chr3 3873022 3875211 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0327 3 3873022 3875211 Vra3g0327 3 3873022 3875211 ECH
Vra3g0327 3 3873022 3875211 Vra8g0490 8 6711112 6714058 PCT
Vra8g1026 8 23774301 23776285 Vra3g0327 3 3873022 3875211 PCT
Vra8g1555 8 32585630 32594805 Vra3g0327 3 3873022 3875211 PCT