Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0306 ATGGAATCCAATTCCAAAATTCAACTCTTTTTCCTCTTCACTCTCCCCCTCATCAACGCAGAAACGCTTCGAACTTACATAGTTCAGCTACACCCTCATGGGATCACCAGCTCTTCTTTCACCTCCAAGCTCAAATGGCACCTTTCATTCATCCACCAAACCCTTTCCTCCGATGACGACCCTTCTTCGCGCCTTCTCTACTCTTACCGTTCCGCCATGGACGGTTTTGCAGCTCAGTTAACCGAGTCTGAGCTTGAGTGCCTCAAGAGCTTGCCTGATGTTATCTCAATTAGGCCTGATACCATGCTCCCGCTGCAGACCACTTACTCTTACAAGTTCTTGGGACTGAACCCTGCTAGAGAAAATGCTTGGTACCAATCTGGTTTCGGCCGTGGAACCATAATTGGGGTGCTTGATACTGGAGTTTGGCCTGAGAGTCCCAGCTTCAATGATCAAGGAATGCCCCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTTCCAATTGTAACAGGAAACTTATTGGTGCAAGGTACTTCACCAAAGGTCATTCTTCAGTGTCACCTTTTAGAATTCCGGAATATCTCTCTCCAAGAGACTCCTCTGGACATGGTACACACACTTCGTCCACTGCTGGAGGAGTGCCTGTGCCTTTGGCGAGTGTCTTTGGTTACGCCTCTGGCGTGGCAAGAGGAATGGCTCCTGGTGCCCACATTGCGGTGTACAAAGTCTGCTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGGGTGGACATTCTCTCCTTGTCTCTAGGTGGCTTCTCTACGCCTCTATATGATGATAACATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCGGTGATATGTGCGGCGGGAAACAATGGTCCTACGGCAATGTCTGTTGCCAATGAGGCTCCTTGGATTGCCACCATCGGTGCAAGCACACTAGACAGGAAATTCCCAGCCACAGTTCGCATGGGAAATGGACAAATGCTCTATGGAGAGTCCATGTACCCACTGAACCATCCGATGAGCAATGGAAAAGAACTTGAACTGGTTTATCTGTCTGAAGGGGACACCGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTAGTCTGCGATCGAGGCGTGAACGGAAGAGCAGAGAAGGGGCAAGTGGTGAAGGAGGCTGGTGGTGTTGCTATGATCCTCGCCAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGATTGGATTTGATGAAGCAGTTACCTTGAAAGATTACATAAACTCCACAAGAAGGCCTCTTGCAAGGATTGAATTTGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCAGCAGTGGCAAGATTTTCAGCTAGAGGACCAAGTTATACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTGAACATCATTGCTGCATGGCCTCAGAATCTTGGTCCTACAGGCCTTCCAGAAGATTCTAGAAGAGTTAACTTCTCTGTCATGTCTGGTACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGCTCGGTTCACCCGAGTTGGAGCCCTGCAGCCATCAAATCTGCAATCATGACAACAGCCGAGGTAACCGACCACACCGGAAGGCCTATTCTTGATGAAAACCAACCAGCAGGAGTTTTTGACATGGGAGCTGGACATGTGAATCCACAGAGAGCATTGAACCCTGGACTTGTGTATGACATCAGGCCAGATGATTATATCATCCACCTTTGCAGCCTTGGATACACAAAGTCAGAAATATTCAGCATCACACACAGAAATGTGAGTTGCAATGGAGTCTTGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTGATATTTAAGGCTGGGGAGAGGAGAAAGATGTTCATCAGGAGACTAACAAATGTGGGAAATGCAAACTCCGTCTACTCAGTGGAGGTCAAGGCACCTGAGGGAGTAAAAGTGATAGTAAAACCCAAGCGGCTTGTATTTAAGCAAGTGAATCAAAGCTTGGCTTACAGGGTATGGTTTATATCGAGAAAAAGGGTTAAAAAAGGTGATGGTTTGGTGACCTATGCAGAAGGGAATTTAACATGGGTACACTCCCAAAATGGTTCCAACAGGGTCAGAAGCCCTGTGGCAGTGACTTGGAAGTCAAAGTAG 2295 0.4728 MESNSKIQLFFLFTLPLINAETLRTYIVQLHPHGITSSSFTSKLKWHLSFIHQTLSSDDDPSSRLLYSYRSAMDGFAAQLTESELECLKSLPDVISIRPDTMLPLQTTYSYKFLGLNPARENAWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQAGKAFNSSNCNRKLIGARYFTKGHSSVSPFRIPEYLSPRDSSGHGTHTSSTAGGVPVPLASVFGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFSTPLYDDNIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPATVRMGNGQMLYGESMYPLNHPMSNGKELELVYLSEGDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILANTEINLGEDSVDVHVLPATLIGFDEAVTLKDYINSTRRPLARIEFGGTVIGKSRAPAVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSVHPSWSPAAIKSAIMTTAEVTDHTGRPILDENQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYIIHLCSLGYTKSEIFSITHRNVSCNGVLKMNRGFSLNYPSFSVIFKAGERRKMFIRRLTNVGNANSVYSVEVKAPEGVKVIVKPKRLVFKQVNQSLAYRVWFISRKRVKKGDGLVTYAEGNLTWVHSQNGSNRVRSPVAVTWKSK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0306 764 ProSiteProfiles Serine proteases, subtilase domain profile. 108 606 - -
Vra3g0306 764 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 20 761 - -
Vra3g0306 764 Pfam Subtilase family 130 588 IPR000209 GO:0006508|GO:0008236
Vra3g0306 764 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vra3g0306 764 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vra3g0306 764 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Vra3g0306 764 CDD PA_subtilisin_like 342 469 - -
Vra3g0306 764 Gene3D - 623 761 - -
Vra3g0306 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Vra3g0306 764 Pfam PA domain 370 453 IPR003137 -
Vra3g0306 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Vra3g0306 764 CDD Peptidases_S8_3 105 573 IPR034197 -
Vra3g0306 764 Gene3D - 336 476 - -
Vra3g0306 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 761 IPR045051 -
Vra3g0306 764 Pfam Fibronectin type-III domain 655 759 IPR041469 -
Vra3g0306 764 SUPERFAMILY Subtilisin-like 105 610 IPR036852 GO:0004252|GO:0006508
Vra3g0306 764 Gene3D Peptidase S8/S53 domain 132 619 IPR036852 GO:0004252|GO:0006508
Vra3g0306 764 SUPERFAMILY PA domain 346 454 IPR046450 -
Vra3g0306 764 Pfam Peptidase inhibitor I9 25 104 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0306 Vra-Chr3 3602792 3605641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0306 9 763 Subtilisin-like Serine Gene Family AT1G04110 66.667 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0306 - - gmx:100790205 1416.36