Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0269 ATGATGATGGCCGAATCATTTCTCTTCAGCATCGCCGACTCACTCATAGCAAAGCTTGCGTCTCAGCTTTATGAAGAAGCTTCTCGGGTGATGGGTTTGTACCATNATCTGCAAGAGTTTACAAACACTCTCTCATTAGTCAAAGCTGTGTTGTTGGATGCTGAGCAAAAGCAGGAGCACAACCATGAGCTGCGGGAATGGCTGAGGCAGCTCAAACGTGTCTTCTCCGATGCCCAAGATGTGCTGGATGAATTTGAGTGCCAAACACTGCAAAATCAAGTTGTCAAAGCTTATGGTACCACCAAAACCAAGGTTAGTCGCTTCTTCTCAAGCTCTAATCCATTGGTTTTTCGTTACAAGATGGCTCAACAAATTAAAGATATCAGCAACCGACTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTACAAACAATTGATGTTGACACACGTGTTGTGCATCAGAGAGAGATGACACACTCCCATGTGAAGGATTCAGATGTAATTGGAAGGGAACATGACAAAAGAAAGATCATACATGTTTTGACGCAGAAGAATCCCATTGATATTGATAAAAATATCTCTGTTATCCCCATTGTGGGGATTGGAGGTTTAGGAAAGACTACACTTGCAAAGTTTGTGTTTAATGATGACAGGATAAACGAGTGCTTCCCATTGAAGATGTGGGTGTGTGTTTGTGAAGACTTTGACATTAAGCAAATGATGGTTAGAATTATCAATTCTGCTAACGATTCTGCTTCACACTCTCATGCTCCTGATTTCCAACAGAATTTGAACATACTAGACATGGAGCAACTGCAAAATCAATTGAGAAANAAACTTGTTGGTAAAAAGTTCTTACTCGTCTTGGACGATGTATGGAATGAAGACCGCGTTAAGTGGGTTGAGTTGAGGACTTTAATACAAGTAGGTGCTGCTGCAGGAAGTGCAGTTCTAGTGACTACTCGTAGTCACTCCATTGCATCCTTGATGGGCACGGTTTCCTCTCACATTTTACAAGGTATTTCTTTGGAGAATTCAGTGTCTCTGTTTGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAATTATCCTCATTTGATAAATATTGGCATAGATATTGTGAAAAAATGCAGCGGGGTTCCGTTGGCAGTGAGAACTATAGGGAGTTTATTATTTTCCAAATTTGAAGCAAAGGAGTGGAAATATGTCAGAGACAGTGAAATTTGGAATTTGCCACAGAAAAAAGAAGATATATTACCAACACTTAAATTAAGTTATGATCTTATGCCATCATATTTGAAGCAATGCTTTGCTTTGTTTTCCCTTTACCCAAAGGATTACAAATTCGTTAATTTGGAAGTAATTACGCTTTGGGGTGCACTCGGACTCCTTCGGTCTCTGAAAAAGAATATGACACAAGAAGATGTTGCCAATCAGTANTTGTATGAACTACAGTCAAGATCTTTTATTCAAGATTTTGTCAGCTACGGAACAGCTTATACATTTAAAATACATGATTTGGTGCATGATCTAGCCCTGTTTGTTGCAAAAGATGAGTGTCTACTTGTAAATTCTCACATTCGAAATATACCTGAGAGTATTCGTCATCTGTCATTTGTTGAAAACGATTTGGATGGCAATTCAATCAGTTCAAAATCAGTAGGTGTGAGAACCATTCTCTTTCCTAAGGATGGTGTGGGTGCCAAGAGTGAAGNTTTCTTTACATTGGTTTCAAGGTACAAATACTTGCATATTTTGAATCTAAGTTATTCTTCAGTTGAAACTTTGCCTGATTTCATTGGGAAGTTAAAACATTTGAGATCTCTCTGTCTTTATAATAATAAGAAAATCAGGAGACTCCCTGATTCTATTTGTGAGCTTCAAAGTTTGCAAGAGTTGGACCTTGGTGGATGCATGGAGTTGGAAGCATTACCCAAAGGATTAANAAAATTGATCAGTCTTCGAGATTTTGTCATAACCACAAAGCAAGCTGTTTTGCCCGAGAATGACATTGCAAACTTGAGCTCTCTTCAGTATTTGACTATTCAATATTGTGATAATGTGGAGTCTTTATTCTCAGGGATAGAACTTCCTTATCTGAAAGCATTGAGTGTTATTAGCTGTAAGAGACTACAATCTTTGTCAATTGACAGTAAGCATTTTCCTGCAATAGAGACGTTGTGTATTGGGAACTGTGACAAATTAGAATTGTCCAAGGGTCATGAAGGCCAGAAGTTCTTCTTAAAGTTAAAAACAATACACTTTCTTTCACTGCCACAGCTACGGACATTGCCTCATTGGCTTCAAGGATCTATTAAAACACTGCTATCATTGAGACTAGAGCACTGCTCCAATCTTGAGGTGCTTCCCGATTGGCTGCCAATGCTAACTTGTTTGAAAGCACTTGACATCAAAGGTTGCCCGAAATTGCATTCTCTGCCAGATGGCATCAATTACCTCTCTGCCCTTGAACGTTTGGAAATCGTTGTCTGTCCGGAATTATTCAGAAAATTCACGCTGCAAGTCAGAGAGCATTGGGACCAAATGTCACACATCAAACGGATTAGCATTCTTGAAAGTAAATAG 2592 0.3904 MMMAESFLFSIADSLIAKLASQLYEEASRVMGLYHXLQEFTNTLSLVKAVLLDAEQKQEHNHELREWLRQLKRVFSDAQDVLDEFECQTLQNQVVKAYGTTKTKVSRFFSSSNPLVFRYKMAQQIKDISNRLDKVAADRHKFGLQTIDVDTRVVHQREMTHSHVKDSDVIGREHDKRKIIHVLTQKNPIDIDKNISVIPIVGIGGLGKTTLAKFVFNDDRINECFPLKMWVCVCEDFDIKQMMVRIINSANDSASHSHAPDFQQNLNILDMEQLQNQLRXKLVGKKFLLVLDDVWNEDRVKWVELRTLIQVGAAAGSAVLVTTRSHSIASLMGTVSSHILQGISLENSVSLFVKWAFKEGEEENYPHLINIGIDIVKKCSGVPLAVRTIGSLLFSKFEAKEWKYVRDSEIWNLPQKKEDILPTLKLSYDLMPSYLKQCFALFSLYPKDYKFVNLEVITLWGALGLLRSLKKNMTQEDVANQXLYELQSRSFIQDFVSYGTAYTFKIHDLVHDLALFVAKDECLLVNSHIRNIPESIRHLSFVENDLDGNSISSKSVGVRTILFPKDGVGAKSEXFFTLVSRYKYLHILNLSYSSVETLPDFIGKLKHLRSLCLYNNKKIRRLPDSICELQSLQELDLGGCMELEALPKGLXKLISLRDFVITTKQAVLPENDIANLSSLQYLTIQYCDNVESLFSGIELPYLKALSVISCKRLQSLSIDSKHFPAIETLCIGNCDKLELSKGHEGQKFFLKLKTIHFLSLPQLRTLPHWLQGSIKTLLSLRLEHCSNLEVLPDWLPMLTCLKALDIKGCPKLHSLPDGINYLSALERLEIVVCPELFRKFTLQVREHWDQMSHIKRISILESK* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0269 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 441 IPR027417 -
Vra3g0269 863 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 8 746 - -
Vra3g0269 863 Coils Coil 68 88 - -
Vra3g0269 863 SUPERFAMILY L domain-like 505 836 - -
Vra3g0269 863 Gene3D - 428 515 IPR036388 -
Vra3g0269 863 Pfam Leucine rich repeat 585 640 IPR001611 GO:0005515
Vra3g0269 863 Gene3D Ribonuclease Inhibitor 523 856 IPR032675 -
Vra3g0269 863 CDD RX-CC_like 4 136 IPR038005 -
Vra3g0269 863 Gene3D - 12 126 - -
Vra3g0269 863 Gene3D - 343 427 IPR042197 -
Vra3g0269 863 PANTHER DISEASE RESISTANCE PROTEIN RP 8 746 IPR044974 GO:0006952
Vra3g0269 863 Pfam Rx N-terminal domain 14 102 IPR041118 -
Vra3g0269 863 Gene3D - 150 339 IPR027417 -
Vra3g0269 863 Pfam NB-ARC domain 173 429 IPR002182 GO:0043531
Vra3g0269 863 PRINTS Disease resistance protein signature 197 212 - -
Vra3g0269 863 PRINTS Disease resistance protein signature 281 295 - -
Vra3g0269 863 PRINTS Disease resistance protein signature 379 393 - -
Vra3g0269 863 PRINTS Disease resistance protein signature 627 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0269 Vra-Chr3 3040194 3043287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0269 180 815 WRKY Transcription Factor Family AT5G45050 22.581 2.23e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0269 - - gmx:100805394 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0269 3 3040194 3043287 Vra3g0269 3 3040194 3043287 ECH