Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0165 ATGATTGCGATTCCCCTGAATCTGGAGCTGATAGCTCCTGTCTTCCTCTTCCTCTCCCTCATCCTTCCCCTCATCTTCTTCTTCTACTCCTCACTTTTCAACAACAAAGAGGCTGCTCCAACCAAACAAACCGTTATTATACCAAAATCATACCCACTCATTGGCTCCTACTTCGCCCTTAAACGCACCGGAAACCGCCGTATCCAGTGGCTATCTGATATAGTCCAAATCTCACCCGCCAACACATTCACCTTCCACCGCCCACTGGGCCGCCTCCAAGTCTTCACTGGCAACCCTGCCAACGTCGAGCACATTCTCAAGACCCGCTTCTCCAACTATCAAAAGGGTTATTCCGTCACTAGCACCCTCTCCGACTTCCTTGGTACGGGGATATTCAACACCGACGGCAACACCTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTCGTTGAACACGTGGTGGATGCCGAACTCTCCGACCGCCTCATCCCCATCATGGCTTCAGCGGCACAGCACGACCAGACCCTTGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGCTTCGACGCGGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGGTTGAGATAAGCAGCAAGCGGTTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATAGGTTCCGAAAAGCGGTTGAGAATGGCTGTGAAGGAAGTGCACGAGTTCGCAAAGAACATAGTGAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCTGATGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACTTGGTTTTTCTGGCTGCTATCGAAGTACCCTCGAGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTACGATGAAGTGAAGCATATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCTGTGCCCATGGACACCAAGGAAGCAGTGGAGGACGACGTCTTGCCGGANGGGACGGTGGTGAAGAAGGGGNCGCTGGTGACTTATCACGTNTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCGGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGGTTGAATCCGGAAAGTGGAAGTTTGTGCCAAAAGATTCTTTCACATATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTTCGGCGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCTGAACTTCATTTCTTTCCTGTCCGCCCAGATGGGTGGTGGTTTTCCTGTGAAGATCATAGAGAAGGAAACCTCAAATTAA 1548 0.5155 MIAIPLNLELIAPVFLFLSLILPLIFFFYSSLFNNKEAAPTKQTVIIPKSYPLIGSYFALKRTGNRRIQWLSDIVQISPANTFTFHRPLGRLQVFTGNPANVEHILKTRFSNYQKGYSVTSTLSDFLGTGIFNTDGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPIMASAAQHDQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEAVEISSKRFRELSPLVWKVKRALNIGSEKRLRMAVKEVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEKEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPXGTVVKKGXLVTYHVYAMGRLESIWGEDWAEFKPERWLQKVESGKWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVELNFISFLSAQMGGGFPVKIIEKETSN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0165 515 Coils Coil 265 288 - -
Vra3g0165 515 SUPERFAMILY Cytochrome P450 48 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 Pfam Cytochrome P450 49 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PANTHER CYTOCHROME P450 17 510 - -
Vra3g0165 515 PANTHER CYTOCHROME P450 94A2-LIKE 17 510 - -
Vra3g0165 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0165 515 Gene3D Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0165 Vra-Chr3 1869699 1871458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0165 8 515 Cytochrome P450 AT5G63450 46.109 1.55e-153 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0165 K20769 K13407 gmx:100817669 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0165 3 1869699 1871458 Vra3g0165 3 1869699 1871458 ECH
Vra3g0165 3 1869699 1871458 Vra8g1054 8 24571952 24573741 PCT