Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0164 ATGATTGAGAATCCTCTGAGTCTGGAACTCATAGCTCCTGTCTTCCTCTTCCTCTCCCTCATCCTTCCCCTCATCTTCTTCTTCTTCTACTCCTCACTTTTCAACAAAAAAGAGGCTGCTCCAACCAAACAAACCGTTACTATCCCCAAATCATACCCACTCATTGGCTCCTACCTTGCCCTCAAACGCATCGGCAACCGCCGTATTCAGTGGCTATCCGATGTAGTCCAAATCTCACCCGCCAACACATTCACCTTCCGTCGCCCACTGGGCCGCCTCCAAGTTTTCACTGGAAACCCCGCCACCGTGGAGCACATTCTCAAGACCCGCTTCTCCAACTACCAAAAGGGCTATTCCTTCATCAGCACCCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGAAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTCGTTGAACACGTGGTGGATGCCGAACTCTCCGACCGCCTCATCCCCATCATGGCTTCAGCGGCACAGCAAGACCAGACCCTCGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGCTTCGACGCCGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGGTTGAGATAAGCAGCAAACGATTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATAGGTTCCGAAAAGCGGTTGCGAATGGCTGTGAGGGAAGTGCACGAGTTCGCGAAGAACATAGTGAGAGAGAAGAAAAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGACATGCTTTCGCGGTTCTTGAGTTCGGGGCATTCTGATGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACTTGGTTTTTCTGGCTGCTATCGAAGTACCCCCGAGTGGAGCAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTATGATGAAGTGAAGCATATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCGGTGCCCATGGACACTAAGGAAGCAGTGGAGGACGACGTCTTGCCGGACGGGACGGTGGTGAAGAAGGGGACGCTGGTGACTTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGAGGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGATTGAATCCGGAAAGTGGAAGTTTGTGCCAAAAGATTCTTTCACATATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTTCGGCGTTTCGCGGTTGTGCCCACGGTGGCTGAAGGGGTGGAGCCCAACTTCATTTCCTTCCTGTCCTCCCAGATGGAAGGTGGTTTTCCAGTGAAGATCATTGAGAGGGAAACCTATAATTAA 1551 0.5177 MIENPLSLELIAPVFLFLSLILPLIFFFFYSSLFNKKEAAPTKQTVTIPKSYPLIGSYLALKRIGNRRIQWLSDVVQISPANTFTFRRPLGRLQVFTGNPATVEHILKTRFSNYQKGYSFISTLSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEAVEISSKRFRELSPLVWKVKRALNIGSEKRLRMAVREVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEQEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTLVTYHVYAMGRLESIWGEDWEEFKPERWLQKIESGKWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVEPNFISFLSSQMEGGFPVKIIERETYN* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0164 516 SUPERFAMILY Cytochrome P450 49 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 Coils Coil 266 289 - -
Vra3g0164 516 PANTHER CYTOCHROME P450 18 511 - -
Vra3g0164 516 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0164 516 PANTHER CYTOCHROME P450 94A2-LIKE 18 511 - -
Vra3g0164 516 Pfam Cytochrome P450 49 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0164 Vra-Chr3 1857849 1859673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0164 8 513 Cytochrome P450 AT5G63450 46.184 9.89e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0164 K20769 K13407 gmx:100818199 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0164 3 1857849 1859673 Vra3g0164 3 1857849 1859673 ECH