Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0158 ATGCCTCTTTCTGCCTCTCTGCTCCAACTTCAACCCTCTTCACAAAAGAAGAAAACTGCTGTTTCCAGAAGTTGGGTTCTGCTCGACCACCATGGCAAACCCACTGTGCTCGATGCAGACAAGCATGCTATCATGCGCCTCGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCCTCCACCATTTTAGGCAGAGACAAACTCATTGTTCTCAATCTAGAGCACATTAAAGCTATCATCACTGCAGATGAGGTGTTGCTGAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGTCGACGGTTACCCAAAGTAAGTGCTTCTGGGGAAGGCCGAGGAGAAGAAGAGACGTGTGCTCAGGATGGTGAAGGTGGAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGACGCACGAACCAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTAAGATTAGCAGTCGCAATTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGCTGACAAGTCGTGTTCAAAAGATTAGAGATGAATTAGAAAACCTACTGGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCCACGGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATACAGGTTCAAGAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCAAAGGGAGGATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATACATCGATGACACAGAAGATTACATCAACATACAGCATAACAACTCTTTGCAACATGTCACACATGGATGCACGCAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATCAGTGCCGGGACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAATCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTGTCTTATGCCAGACGCAAAGGCCTTGTTGGGTCTTGA 1209 0.4425 MPLSASLLQLQPSSQKKKTAVSRSWVLLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKLIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGEGRGEEETCAQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNTGSRIHKSSRASGTTVQREDDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQHNNSLQHVTHGCTQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKSPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0158 402 MobiDBLite consensus disorder prediction 115 129 - -
Vra3g0158 402 Gene3D Magnesium transport protein CorA, transmembrane region 104 314 - -
Vra3g0158 402 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 11 402 - -
Vra3g0158 402 Coils Coil 188 215 - -
Vra3g0158 402 CDD Mrs2_Mfm1p-like 25 399 IPR039204 -
Vra3g0158 402 Gene3D - 6 96 - -
Vra3g0158 402 MobiDBLite consensus disorder prediction 227 261 - -
Vra3g0158 402 MobiDBLite consensus disorder prediction 227 263 - -
Vra3g0158 402 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 402 IPR039204 -
Vra3g0158 402 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0158 Vra-Chr3 1784913 1788612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0158 1 375 MRS2 Gene Family AT5G64560 67.624 1.68e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0158 K16075 - gmx:100799368 650.203