Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0148 ATGGAGTCGCACGGCGGAGGTCCCCTTCGTTCCCGCAGTTCCCAGTCCCCTTCACCTTCCCACTCCGCCTCAGCCTCCGCCACATCCTCAATCCACAAGCGCAAGCGTGCATCCGAAGACCACGCGCCTCCCTTCCCGCCCTCCTCCTTCTCGGCTGACACTCGCGACGGCGCCCTCACCTCCAATGACGACCTGGAGAGCATCTCCGCCCGTGGCGCCGACTCCGATTCAGACGACGACTCCGAGGACGCCGTCGTCGATGATGACGAAGAGGACTACGACAACGACTCCTCCATGCGCACCTTTACCGCCTCCAGACTCGGTAACCCTCCCTCCGCTCCCCGTAATACCAAGCTAAAGACTGATAACTCAGCTGTAAAAATCGAGAACTCCGACGGCGCAAAAGACGCCGCAAATGCCGGAGCTGGTGCCATGGAGATTGGACCCGTCCCTAGCATTGTGGTTAAGGAAGACCCGACTAAGATATTTACAGATAATTTGCAAACGAGTGGGGCTTATACAGCTCGGGAAGAGAGTCTCAAGAAGGAGGAGGAAGCGGGGAGGCTTAAATTCGTATGCCATTCAAACGATGGTGTTGATGAGCATATGGTTTGGTTGATTGGATTGAAGAATATATTTGCTCGACAACTTCCCAATATGCCCAAGGAGTATATTGTTCGACTTGTCATGGACAGGAGCCACAAGTCTGTAATGGTCATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAAGTTTGGTGAGATAGCTTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGTGATGTGGATGGGCTGACACATTTTCTCACATATGCTGACAACAATGCCGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGGATTCTGATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGACAGGCTATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATAGTCTATACTGGAATTGATTTTCAGAAGAAAGAAGCGGGCATTCCTAAAAAAATTATTGACGACATCCCCGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCTAGATTCAGAAGTCTAAATGTCTCTACTGACAATACTACTAATCAAAAACATTTGTCTGGTTTTATGCGATCACTTCTAAAGTCTATGCTTGATCACGCTGACGCATGGCCATTCAAGGAGCCTGTTGATGCACGGGATGTCCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCTAAGAGGGTGGAGTCAGAGCTATATTATGTAACATTTGAGATGTTTGTTGCCGATGTCAGAAGAATGTTTGCAAATGCGCGCACTTATAATTCTCCAGAAACCATTTATTACAAATGTGCTACAAGGTTAGAATCCCACTTTCAAAGCAAAGTACAAGCGGGTCTTCAGTCTGGCTCAAAAATTCAGTAG 1617 0.4669 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKRASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEEDYDNDSSMRTFTASRLGNPPSAPRNTKLKTDNSAVKIENSDGAKDAANAGAGAMEIGPVPSIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCHSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNTTNQKHLSGFMRSLLKSMLDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESELYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLESHFQSKVQAGLQSGSKIQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0148 538 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 196 343 IPR000182 GO:0016407
Vra3g0148 538 CDD Bromo_gcn5_like 433 529 - -
Vra3g0148 538 Gene3D - 185 349 - -
Vra3g0148 538 PANTHER BNAC04G26160D PROTEIN 3 538 - -
Vra3g0148 538 CDD NAT_SF 236 290 - -
Vra3g0148 538 MobiDBLite consensus disorder prediction 53 68 - -
Vra3g0148 538 PANTHER GH11602P 3 538 IPR037800 GO:0004402
Vra3g0148 538 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 348 IPR016181 -
Vra3g0148 538 SMART bromo_6 423 532 IPR001487 GO:0005515
Vra3g0148 538 MobiDBLite consensus disorder prediction 76 95 - -
Vra3g0148 538 Pfam Bromodomain 435 517 IPR001487 GO:0005515
Vra3g0148 538 Gene3D - 411 535 IPR036427 GO:0005515
Vra3g0148 538 MobiDBLite consensus disorder prediction 1 122 - -
Vra3g0148 538 PRINTS Bromodomain signature 445 458 IPR001487 GO:0005515
Vra3g0148 538 PRINTS Bromodomain signature 459 475 IPR001487 GO:0005515
Vra3g0148 538 PRINTS Bromodomain signature 494 513 IPR001487 GO:0005515
Vra3g0148 538 SUPERFAMILY Bromodomain 417 528 IPR036427 GO:0005515
Vra3g0148 538 MobiDBLite consensus disorder prediction 8 31 - -
Vra3g0148 538 ProSitePatterns Bromodomain signature. 447 505 IPR018359 -
Vra3g0148 538 ProSiteProfiles Bromodomain profile. 442 513 IPR001487 GO:0005515
Vra3g0148 538 Pfam Acetyltransferase (GNAT) family 236 314 IPR000182 GO:0016407
Vra3g0148 538 MobiDBLite consensus disorder prediction 98 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0148 Vra-Chr3 1677916 1687730 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra3g0148 Bromodomain 2.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0148 K06062 - gmx:100791610 937.176