Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0062 ATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCTCTGAATACGTGGGTGTTAATCTCGAATTTCAAGCTGTCTTATAAGCTTCTCAGACGTGACGACGGAACTTTCAATCGTGAGTTAGCAGAGTTTCTTGATAGGAAAGTCCCTGCCAATGCAATTCCCGTTCATGGGGTGTTTTCAATCGATCATGTTGATAGAAACGTTGGCTCGTTTTACCGGGTGTATTTGCCGGCCTCTGGGGACGAGGCTCAATGGGGTATCAGAGACCTTGAGAGGCCGTTGAGCACCACGGAAATTGTTCCTGTAATCATATTCTTTCATGGGGGAAGCTTCTCTCATTCCTCGGCAAACAGTGCTATCTACGATACCTTCTGCAGGTACCTTGTGAGCATTTGCAAGGCTGCTGTGGTGTCCGTGAACTACCGGAGATCGCCGGAGCATCGGTATCCGTGTGCCTACGATGATGGATGGACAGCATTGGAGTGGGTGAAGTCCAGAACGTGGCTGCAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTAAAGGCTGCAGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTCGGAGGAGAGAAGAGGACGGAATCAGAGTTGAGGTTGGATGGGAAATACTTTGTGAGGTTGAAGGATCGTGATTGGTATTGGAGGGCATTTCTGCCTGAAGGAGAGAATAGAGACCATCCTGCTTGCAACCCCTTTGGACCAAGGGGGAAAAGCCTTGCAGGACTCAGGTTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAACTGGCATATACAAAAGGTCTCGAGGATTCTGGACAAGAGGTCAAACTTCTCTATCTCAAGGATGCCACTATTGGCTTCTACTTCTTGCCAAACAATGAACATTTCTACTGCCTCATGAGGGAAATCAACAACTTCGTGAATTCTGACTGTTAA 1035 0.4792 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVHGVFSIDHVDRNVGSFYRVYLPASGDEAQWGIRDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRYLVSICKAAVVSVNYRRSPEHRYPCAYDDGWTALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVKAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGKSLAGLRFPKSLVCVAGLDLLQDWQLAYTKGLEDSGQEVKLLYLKDATIGFYFLPNNEHFYCLMREINNFVNSDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0062 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Vra3g0062 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vra3g0062 344 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 341 - -
Vra3g0062 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vra3g0062 344 SUPERFAMILY alpha/beta-Hydrolases 74 341 IPR029058 -
Vra3g0062 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Vra3g0062 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0062 Vra-Chr3 696435 699190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0062 1 342 Carbohydrate Esterase AT3G63010 73.469 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0062 K14493 - gmx:100788435 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0062 3 696435 699190 Vra8g1185 8 26996035 26998880 PCT