Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0015 ATGTATCAGTGTAGTTCCCAAATGTACGGAACTGATTGGGAATCCTACATGGGGATTAGCAACCTAGCTAAGGTTGTTGGATCAGAACAAATGAGTGTTCTTGAGCCAAAAAACTCACCCTTCAACATTGTCACCGCCCCACAAGGCTTTTGTGCAACTGCAACAAAAGGGCTTGTGAGTTTTCAAGCTCAACAACATGCTCATCAGATTGAAGTTCCTGCTTGGTGCTTTGACTCTAACATGCTGAATATTCGCCAAGCCTCTGGGGATAACTTCACCACCAAACAAGATCCACCCTCTTCTCAATTCACAAGCTCCTTGTGCCCGGTTGCTGAATCTTTCTTGTCGTCCAGCACTGGTGCAGATTGTCCTTCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAACATAGCAGTATGCAGCCTGATGGTATGCCATATTACGATCGCTTTTCCCAAGAAGAAGATAAATTACTCAGAGATGATGCTGCCACGGATGAAAGGCCCCTTGAAATTTCCTTTCAGAGAAACCAGTTGGAATCATGTACAAAGCCACAAAAGCAAGCTCCTCATAGACTTTGTGGGGTTGCCTGTGTAACTTCTAGCAACTCTGCTTCTAGAAGAGGCAAAAGAAGAATAAAATGGACCGACGATCTACACGAGCCATTTATGATGATTGTTAACAGTCTTGGTGGTCCAGAAAAGGCAAAACCTAAGGCTATACTAGATATGATGAAATCAGATTTGCTGTCCATTTCTCATGTTAAAAGTCATTTACAGAAATGTAGGTCTACAATAAACATGCACAAAGCTTTGCAGGAAAAATCCGAGGAAGGACAGAGAATGGATGGGGTGGCTGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCAAGGCAACTGCAGCTAGAGGTTCGGAGGAATATCTGCCAACAACTAGAGATGCAACGAAATCTCCAAATGCTAATTCAACAGCAGAGCCAACAACTCAAAGTAATGTTAGATTACCAAAAGAAAAAACCCAAACTGGACACAGAACTGGAAGAAACTGTCCCCTAA 1071 0.4202 MYQCSSQMYGTDWESYMGISNLAKVVGSEQMSVLEPKNSPFNIVTAPQGFCATATKGLVSFQAQQHAHQIEVPAWCFDSNMLNIRQASGDNFTTKQDPPSSQFTSSLCPVAESFLSSSTGADCPSSSEKYCKITSYSEKHSSMQPDGMPYYDRFSQEEDKLLRDDAATDERPLEISFQRNQLESCTKPQKQAPHRLCGVACVTSSNSASRRGKRRIKWTDDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRSTINMHKALQEKSEEGQRMDGVAELQVKIHMQIEESRQLQLEVRRNICQQLEMQRNLQMLIQQQSQQLKVMLDYQKKKPKLDTELEETVP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0015 356 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 356 - -
Vra3g0015 356 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 267 IPR006447 GO:0003677
Vra3g0015 356 Gene3D - 212 269 - -
Vra3g0015 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 356 IPR044848 GO:0003700
Vra3g0015 356 SUPERFAMILY Homeodomain-like 212 269 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0015 Vra-Chr3 169107 171797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0015 200 341 G2-like Transcription Factor Family AT4G28610 42.568 8.61e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vra3g0015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0015 - - gmx:102662952 550.051