Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1677 ATGGTTGATCAGGTTCAGCATCCTAGAGTGATGGAGAAGGTTGCAAGTCAGCTGCATCTTCGAACTGGCCTTCCACTGTACCACCAGAGGCGATCTTTCCAGAATTACTCCAATGCTGTCTCATCAGGGAAACACTACAATGCAGCATTTCAGTATCCAGTGATGCCAGCATGCAGAGGCGTAATTGATGTCTCTGCTGTTGCAGCCTCACCTGTGTTTGTTGCTGCTCCTGCTGAGAAGGGAAACTTCCTCATTGACTTTCTCATGGGTGGAGTTTCTGCTGCTGTCTCCAAAACTGCTGCTGCCCCCATTGAACGCGTCAAGCTCTTGATCCAGAACCAGGATGAGATGATCAAAGCTGGTAGACTCTCTGAGCCCTACAAAGGTATTGGTGACTGTTTTAAGAGGACAATCAATGAAGAGGGTTTTGGTTCCCTTTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCACTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAAGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTCTTTGTCTACTCCCTTGACTACGCTCGTACCCGTCTGGCTAATGATGCCAAGGCTGCAAAGAAAGGTGGAGAAAGGCAATTCAATGGCCTCGTTGATGTCTACAGGAAGACATTAGCTTCTGATGGTGTTGCTGGTCTTTACCGTGGCTTCAACATTTCCTGCGTTGGAATCATTGTGTATCGTGGCCTCTACTTTGGAATGTATGATTCTCTCAAACCAGTTCTCTTAACCGGCTCTTTACAGGATAGCTTTTTCGCTAGCTTTGCTCTTGGATGGTTGATCACGAATGGTGCTGGTTTAGCTTCATACCCAATTGATACGGTGAGAAGAAGAATGATGATGACATCTGGTGAAGCTGTGAAGTACAAGAGCTCCATGCATGCGTTCACACAGATTCTTCAGAATGAGGGTGCAAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTTCGTGCTGTTGCCGGTGCTGGTGTGCTGGCTGGTTATGACAAGTTGCAGGTCATAGTCTTTGGCAAGAAGTATGGCTCTGGTGGAGCTTAA 1152 0.4688 MVDQVQHPRVMEKVASQLHLRTGLPLYHQRRSFQNYSNAVSSGKHYNAAFQYPVMPACRGVIDVSAVAASPVFVAAPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTINEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMHAFTQILQNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1677 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 372 IPR018108 -
Vra2g1677 383 SUPERFAMILY Mitochondrial carrier 81 368 IPR023395 -
Vra2g1677 383 Gene3D Mitochondrial carrier domain 84 379 IPR023395 -
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 149 169 IPR002067 GO:0055085
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 251 269 IPR002067 GO:0055085
Vra2g1677 383 PRINTS Mitochondrial carrier protein signature 295 317 IPR002067 GO:0055085
Vra2g1677 383 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 383 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 PRINTS Adenine nucleotide translocator signature 83 95 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 PRINTS Adenine nucleotide translocator signature 127 148 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 PRINTS Adenine nucleotide translocator signature 160 172 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 PRINTS Adenine nucleotide translocator signature 186 199 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 PRINTS Adenine nucleotide translocator signature 291 307 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vra2g1677 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 174 IPR018108 -
Vra2g1677 383 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 383 - -
Vra2g1677 383 Pfam Mitochondrial carrier protein 287 372 IPR018108 -
Vra2g1677 383 Pfam Mitochondrial carrier protein 185 281 IPR018108 -
Vra2g1677 383 Pfam Mitochondrial carrier protein 82 178 IPR018108 -
Vra2g1677 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 186 278 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1677 Vra-Chr2 24945501 24947521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1677 1 383 Antiporters AT5G13490 78.827 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1677 K05863 - gmx:100793257 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1677 2 24945501 24947521 Vra2g1677 2 24945501 24947521 ECH