Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1671 ATGGCTCAGAAGGCGGAGAAAAACGACACCGACTTCAAGGTCCCGGAACCAATCACGCCCTGCGCCACCACTACCGCCGCCGCTGCAACTTCGATTTCCGAGCCTTCTAGATTCTTCGACGCCGTCGCTCCGGCTACGTCGTCGCGTTCGCCCAAGCGCTCGCTTCCGCAGGAGGACGCTTCGAGCGCGGACCGGACGGCGGCATCGGAGCCGAAGCGCGCGGTGAACAGGTGCTCGGGATGCCGGCGGCGCGTCGGGCTTACCGGATTTCGTTGTCGGTGCGGTGACCTCTTCTGCGCTGAGCACCGGTACACCGATCGCCACGACTGCTCCTACGACTACAAGGCAGCCGGGAGAGAGGCCATCGCGAGGGAGAATCCCGTCGTGAAGGCCGCGAAGATCGTGAAGGTCTGA 414 0.6449 MAQKAEKNDTDFKVPEPITPCATTTAAAATSISEPSRFFDAVAPATSSRSPKRSLPQEDASSADRTAASEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKAAGREAIARENPVVKAAKIVKV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1671 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Vra2g1671 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Vra2g1671 137 Gene3D - 46 133 IPR035896 -
Vra2g1671 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Vra2g1671 137 MobiDBLite consensus disorder prediction 40 73 - -
Vra2g1671 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 137 - -
Vra2g1671 137 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 137 - -
Vra2g1671 137 SUPERFAMILY AN1-like Zinc finger 64 131 IPR035896 -
Vra2g1671 137 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1671 Vra-Chr2 24883424 24884293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1671 50 137 C2H2 Transcription Factor Family AT3G52800 52.273 1.57e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1671 - - gmx:100794830 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1671 2 24883424 24884293 Vra2g1671 2 24883424 24884293 ECH