Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1665 ATGATTGAGACACTCTCATTCTTCTTCCTGCTTCTGTTCTTGTTCCTCATTCTCAGGTGCACCGGAAAAACCACCTCCGACCATCTCCACCTTCCACCAAGCCCTCCAAGCCTCCCTCTGCTAGGGCACCTCCATCTCCTCTCTTCATCCCTCCACACCTCTCTCCACACCCTCTCCGCCGCCCACGGCCCCCTCCTCCTCCTCCGTCTTGGACCCTCCCGCCGACTCCTCGTGGTCTCCTCCGCTGAAGTTGCCACCCACATCTTCAAGACCCACGATCTCGCGTTCTCTTCCCGGCCTGTGTTCGCCTTGGCCGAGAAGCTGCCCTTTGGGCTGGCGGGGTTCGTGACGGCCCCCTACGGGCCGTACTGGCGGTTCGTGAAGAAAGTGTGCATGACGGAACTGCTGAGCCCGCGGCAGCTGGAAGGGTCTAAGAAGGTGAGAAAGGAAGAGATGGAAGGTTGGGTGAAAGGGATGTTAGAGCATGTGAGAGAGAAGGGTGGTGCAATCGATTTGGGCTCTCAACTCATGAAACTCACCAACAACATTACTTGCAGGATGGCCATGACCACCTGTTGTTTGGAGAAATACGAGGATGCAGAGAAGATCAGGCAGCTGGTAAAGGAATCCTTCGAGCTTGCTGCAAAGTTATGCTTTGGAGATGTGTTGGGTCCTCTGAAGCAGTTGAGTTTCTGGGTGTATGGGAAGAAGGCTTTGGATGTGAGCAAAAGGTACGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAACACAAAAGATCATCACGTCACAGTGAAAACGAAAGGGATTTGATGGACATTCTGCTCGATGTTCACCACGATCCTCATGCAGAGTTCAAGATCACAAGAACTCACATTAAAGCCTTCTTCTTGGATCTCTTCATTGCAGGCACAAACACCTCAGCAGAAGGGACGCAATGGGCGATGGCTGAGCTGCTGAACCACCCTGAAGCTTTTGAAAGGGTGAGAAAGGAGATAGAGTTGGTGACAGACAATGGAAGGCTAGTTGAGGAGTCAGATGTTGGAAAAATGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTCCATCCACCAGCACCAGTGACGACAAGAGAGTGTCGACAACACTGCAAGATAAATGGGTTTGACGTGGCACCAAAGACAGCAGTGGCAATCAATTTGTATGCCATAATGAGGGACCCTGATTCCTGGGACAATCCGAATGAGTTTGTCCCTGAAAGGTTCTTCTTGCAAGAGGAAGATGAGAAAATGAAGTTCAATTTTGTTCCATTTGGAGGTGGAAGGAGAGGCTGTCCAGGAACAGAACTTGCTTTTATCTTCATAAACACTGCAGTGGCTGCTATGGTGCAGTGCTTTGATTGGAAGATTGATGAAGATGGAAAAGGAAAAAAGGTTAATATGCAATCTGGTTCATCTGGCTTGTCTTTGAGCATGGCTCAACCCCTTCTCTGTGTTCCTCTACTACATTTTAATCCATATCATGCATAA 1515 0.497 MIETLSFFFLLLFLFLILRCTGKTTSDHLHLPPSPPSLPLLGHLHLLSSSLHTSLHTLSAAHGPLLLLRLGPSRRLLVVSSAEVATHIFKTHDLAFSSRPVFALAEKLPFGLAGFVTAPYGPYWRFVKKVCMTELLSPRQLEGSKKVRKEEMEGWVKGMLEHVREKGGAIDLGSQLMKLTNNITCRMAMTTCCLEKYEDAEKIRQLVKESFELAAKLCFGDVLGPLKQLSFWVYGKKALDVSKRYDELLEKVLKEHEHKRSSRHSENERDLMDILLDVHHDPHAEFKITRTHIKAFFLDLFIAGTNTSAEGTQWAMAELLNHPEAFERVRKEIELVTDNGRLVEESDVGKMPYLQAVVKETLRLHPPAPVTTRECRQHCKINGFDVAPKTAVAINLYAIMRDPDSWDNPNEFVPERFFLQEEDEKMKFNFVPFGGGRRGCPGTELAFIFINTAVAAMVQCFDWKIDEDGKGKKVNMQSGSSGLSLSMAQPLLCVPLLHFNPYHA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1665 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 502 - -
Vra2g1665 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 6 502 - -
Vra2g1665 504 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vra2g1665 504 Gene3D Cytochrome P450 17 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 SUPERFAMILY Cytochrome P450 29 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1665 504 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1665 Vra-Chr2 24797105 24802195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1665 1 502 Cytochrome P450 AT4G15360 44.834 2.12e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1665 K23814 - gmx:100790065 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1665 2 24797105 24802195 Vra2g1665 2 24797105 24802195 ECH