Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1661 ATGGCAAAGTCCAAGAACAATGCCAAGAAGTTGTCTTACATTGCAGTCCCTTCTCAGATCATCAACTCCATATCGTCTTCTTCTCTTCAATCCTTGCTAGAATCTCCCAAGAAATGTGCAAGACATTCCAAATTCTTCAGCTTTGTCAAATGGGGTAGGCCAAGATTGTTCCTTTTCATTCTCTCTCTTCTTGCCTTCTTAGCCATGATCAAGCTGGGCTTCAATCTGGACACTCCATTTCCTCCCTTCCCTTGTGCAACCTCAGTAGGCTTCTCAAAATCCATGCCCGGAGTTGTGTCACAGGAGGGTGGTGTTTTGGATGGTGCAGATGACACTGTTTCAGAGCCTCTGATTACCAGTGTGCAGTTACATGCACAGGTTCCAAGAGGGGTGGAAACCTTTGAAGAGGTTGAAAAGAGTGAGTTTTGGGAGCAGCCAGATGGGTTGGGTTACAAGCCTTGCTTAGGTTTCAGCCGGGAGTATAGGAGGCAGAGTGAGGGAATTGTGAAGAACAGGAGGAGGTACCTCATGGTGGTAGTTTCTGGAGGGATGAATCAGCAGAGGAATCAGATTGTTGATGCTGTTGTCATTGCTAGGATTCTTGGGGCTGCTTTGGTTGTTCCTATATTGCAAGTCAATGTCATTTGGGAAGATGAAAGTGAATTTGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGAGGGTGGTTTCAGCTTTGCCATCAACACATCTAATGACAAGGCCAGTGGAGGGAAGCCCTCCCCTTCATGCCACTCCCAGTTGGATTCGGTCACACTATCTCAGAAGATTCAACAGAGAAGGTGTCTTGCTTTTACGTGGACTGGATTCGAGGCTGACAAAGGATCTTCCTCCTGATCTTCAAAAGCTTAGATGCAAGGTTGCTTTTCATGCATTAAGGTTTGCAAAGCCTGTTCAGGAACTTGGTAACAACTTTGCTGAGAGAATGAAAAGCAAGGGACCTTACCTTGCTCTCCATCTACGGATGGAAAAGGATGTCTGGGTGAGAACTGGTTGTCTACCTGGTCTGAGTCCTGAGTATGATGAGATTGTAAAAAATGAGAGGATAAATAGGCCCGAGCTCTTGACTGCGAAATCAAACATGACATACCATGAAAGGAAGCTGGCTGGTCTCTGCCCCTTAAATGCTGTGGAGGTTACAAGGCTGCTTAAAGCTCTAGGAGCTCCAAAAAGTGCAAGAATTTACTGGGCTGGAGGACAACCGTTAGGTGGGAAAGAGGCATTGCAACCACTAATCAATGAGTTTCAAAATATTTACAGTAAGGAAGATCTTGCTTTACCTGGAGAACTAGAACCATTTGCAAATAAAGCTTCCCTAATGGCCGCCATAGATTACATAGTCTCTGAGAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCACAGGGCTTATGCAGGTCACAAGAAATATATAACACCAAACAAAAGACATATGCTGCCCTATTTTCTGAACTCTTCCCTCCCTGAAGAAGAGTTCAACAGCATCATCAAGGAATTGCATCAAGACTCATTAGGTCAGCCAGAACTCAGGACTAGCAAGGCTGCAAGAGATGTCACTAAGTATCCTGTTCCTGAGTGCATGTGCAATGACTCATAA 1677 0.4484 MAKSKNNAKKLSYIAVPSQIINSISSSSLQSLLESPKKCARHSKFFSFVKWGRPRLFLFILSLLAFLAMIKLGFNLDTPFPPFPCATSVGFSKSMPGVVSQEGGVLDGADDTVSEPLITSVQLHAQVPRGVETFEEVEKSEFWEQPDGLGYKPCLGFSREYRRQSEGIVKNRRRYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWEDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMTRPVEGSPPLHATPSWIRSHYLRRFNREGVLLLRGLDSRLTKDLPPDLQKLRCKVAFHALRFAKPVQELGNNFAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEYDEIVKNERINRPELLTAKSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKSARIYWAGGQPLGGKEALQPLINEFQNIYSKEDLALPGELEPFANKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPYFLNSSLPEEEFNSIIKELHQDSLGQPELRTSKAARDVTKYPVPECMCNDS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1661 558 PANTHER OS02G0726500 PROTEIN-RELATED 12 558 - -
Vra2g1661 558 Pfam GDP-fucose protein O-fucosyltransferase 175 491 IPR019378 -
Vra2g1661 558 CDD O-FucT_plant 175 496 IPR024709 -
Vra2g1661 558 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 12 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1661 Vra-Chr2 24741370 24744494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1661 10 558 Miscellaneous Gene Families AT3G07900 63.958 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1661 - - vun:114169624 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1661 2 24741370 24744494 Vra2g1661 2 24741370 24744494 ECH