Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1655 ATGGACTACGAACCCTACGACAGTAGCGGAACTGATGATGATCTTCCACCAACCCATCAAAATAGAATTTCCAGGGGAGGAGGTGGAGGAGGAGGAGGTGGGGGACGTCTTGCCGGGAATGGAAGATCTGCTGTTGGTTCAATTCCGTACCCCAGGATGTATGGGGAAATTGATATGGAGACCCAGATTCATCAGCTTGAGCAAGAAGCTTACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTAATTACAGAGCTTAGAAAAGAGCTGAGATTGTCGAATGAGGAGCACCGAGAACTTCTTGGTCGAGTTAATGCCGATGATGTGATCCGGAGGATAAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTACTTAATACTGGTCAAGGTCTTCATGACTCGGTTCCCAGTCCCACAGTCTCTGCTTCTCGCAAGAAGCAGAAGATTACACCATCTGTACCATCACGATCTTTCGCCGGGCCTTCTCCCCCATTTCACCCCCAAACAGTGAGTGCACCCCACCAACCATCTTCTTCTGCAGCAAAACGAGGATCTGTTCCTGGATCAAAGGGGAAAAAACACAAACCAGGTCAAATATTACCTGGTGTCTCTTCGATGAAGCAGTATCCTTCCACTGGACCAGGTGGAAGGACTCAAGTGCCTAATAGAGCTGTCACGGGTGAGCATGCAGAGGGAGCATCATTTGACTCTTTGGTTGGTAGGAGAGTGCGGACAAGATGGCCTGATGATAATAACTTTTATGAAGCTGTTATCACAAACTACAATCCGGCTGATGGACGCCATAATCTGGTCTATGACATGGGAAGTGCAAATGAAACATGGGAATGGGTTAATCTTTCAGAGATATCTCCTGAAGATATTCAGTGGGTTGGTGAGGATCCAGGAATCAATCATCGTGGGGGTTTTGGGGGCTCTGGTCATGGGATGAATAGGTCTGTTGGACGGGATGGTGTTCCTGGAGGTGGAAGAGGCAGGGGAGCTACAAAGGGGCAATCCAGAAAAGATTTTTTGTCATCTCAAAATGGCATAGGAAAGAAGGCGCCTGATGACATACAAATACTTCACACAGACACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGCAAATCATCCCGATCCCCTTGAAATTGAGAAAGCAAAGAAGGTATTGAAGGATCATGAACAGGCTCTTATTGATGCAATTGCAAGACTCAATGATCTTTCTGATGGTGAAAGTGATGGGGCTGGCCATCATTTCTCACATGCTCAATCAATGGATCGAGAGTGA 1326 0.4706 MDYEPYDSSGTDDDLPPTHQNRISRGGGGGGGGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQTGGHQPGVLNTGQGLHDSVPSPTVSASRKKQKITPSVPSRSFAGPSPPFHPQTVSAPHQPSSSAAKRGSVPGSKGKKHKPGQILPGVSSMKQYPSTGPGGRTQVPNRAVTGEHAEGASFDSLVGRRVRTRWPDDNNFYEAVITNYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDGVPGGGRGRGATKGQSRKDFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQALIDAIARLNDLSDGESDGAGHHFSHAQSMDRE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1655 441 Coils Coil 93 113 - -
Vra2g1655 441 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 59 146 IPR005491 -
Vra2g1655 441 SUPERFAMILY Tudor/PWWP/MBT 249 289 - -
Vra2g1655 441 Pfam ENT domain 61 128 IPR005491 -
Vra2g1655 441 SMART ENT_2 59 132 IPR005491 -
Vra2g1655 441 Gene3D ENT domain 54 165 IPR036142 -
Vra2g1655 441 MobiDBLite consensus disorder prediction 216 231 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 132 168 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 422 441 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 130 234 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 423 441 - -
Vra2g1655 441 PANTHER PROTEIN EMSY-LIKE 3-LIKE ISOFORM X2 1 441 - -
Vra2g1655 441 Gene3D - 244 295 - -
Vra2g1655 441 Coils Coil 396 416 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 1 44 - -
Vra2g1655 441 MobiDBLite consensus disorder prediction 320 368 - -
Vra2g1655 441 SUPERFAMILY ENT-like 54 171 IPR036142 -
Vra2g1655 441 PANTHER PROTEIN EMSY-LIKE 4 1 441 IPR033485 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1655 Vra-Chr2 24695665 24702389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1655 - - gmx:100791651 819.305