Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1654 ATGGCTTCTGTGCAAATCCTGTGTGCATGCACAAGTAGTAGCCATGTTCAACACCAGGGTTCAATCAGATACAGATATGGATACCCCAGTGAGAAGATGAATGGGAGAAGGTGTTCAGTTAGAGTTGAAGGTGGGAACGGAATGGTTGTTCCGAGTTCAGAGGAAGAGAAGAGGAAGCTGAGAGTGTTGGTGGCTGGTGGAGGCATTGGTGGCCTTGTTTTGGCTCTGGCTGCAAAGCACAAAGGGTATGCAGTGAAGGTGTTTGAGAAGGATTTAAGTGCTGTTAGAGGTGAAGGTAGGCACAGAGGCCCAATTCAACTCTTGAGCAGTGCCCTTGCTGTGCTGGAAGCCATCGATCAGAGTGTTGCATGGAAGATAAAGGAGGCTGGCTGTGTCACTGCCAATAGGACTAATGGCTTTGCTGATGGTTTATCTGGAGAATGGTTCGGTGAGTTTGATCTTTTGACTCCTGCTTCAAGGAAGAGGCTTCCTCTTACCCTAGTCATATGTAGGATGACACTGCAAGATATATTAGTCAATGCAGTTGGTCCAAAGATACTAAGAAACAAATCTAAAGTTGTGGATTTTATTCAGGAACCTAGCAAGGTTAGAGTGATCCTTGAAAATGGTGAGCAACATGATGGTGATATCTTAATAGGAGCAGATGGAATATGGTCAGAAGTTCGTTCGAAACTCTTTGGGCGCCAAGAAGCAAATTACTCAGGTTTCACAAGCTATAGTGGATTAACAAGTTATGTACCACCGTATATTCATACAATTGGGTATCGAGTGTTCTTGGGCATGAACCAGTACTTTGTTGCTTCAGATGTTGGCCATGGAAAGATGCAATGGTATGCTTTCCATGCGGAACCCCCATCAAATGATCCTTTCCTAGAAGCAGGTAAGAAGAAGAGGCTTTTGGATCTCTTTGGTAATTGGTGCAATGAAGTGATTACATTAATATCAGAAACACCAGAGAATATGATTCTGCAGAGGGATATATATGACAGAGACATGATCAACACTTGGGGAATTGATAGAGTGACTTTGTTGGGTGATGCAGCTCATCCAATGCAACCAAATCTTGGTCAAGGGGGTTGCATGGCAATAGAGGACTCTTACCAATTGATACTTGAGCTTGACAAGATTGCTAAACATGATCCTGATGAGTCTGAAGTTATCTCAGCCCTTAGAAGATATGAGAAGAAAAGAATTCCAAGGGTAAGGGTGTTACACACAGCTAGCAGAATGGCATCAAAAATGCTAGTCAACTATCAACCCTACATTGAATTTAAATTTTGGCCCCTATCAGAGAATGAAATAAATATACAGATAAAGCACCCTGGCATTCATGTAGCTGGAGCCCTTTTCAAATTCACTTTTCCACAGTTTGTTATTTGGATGATGGCAGGGCATGGGCTGTGGTGA 1428 0.43 MASVQILCACTSSSHVQHQGSIRYRYGYPSEKMNGRRCSVRVEGGNGMVVPSSEEEKRKLRVLVAGGGIGGLVLALAAKHKGYAVKVFEKDLSAVRGEGRHRGPIQLLSSALAVLEAIDQSVAWKIKEAGCVTANRTNGFADGLSGEWFGEFDLLTPASRKRLPLTLVICRMTLQDILVNAVGPKILRNKSKVVDFIQEPSKVRVILENGEQHDGDILIGADGIWSEVRSKLFGRQEANYSGFTSYSGLTSYVPPYIHTIGYRVFLGMNQYFVASDVGHGKMQWYAFHAEPPSNDPFLEAGKKKRLLDLFGNWCNEVITLISETPENMILQRDIYDRDMINTWGIDRVTLLGDAAHPMQPNLGQGGCMAIEDSYQLILELDKIAKHDPDESEVISALRRYEKKRIPRVRVLHTASRMASKMLVNYQPYIEFKFWPLSENEINIQIKHPGIHVAGALFKFTFPQFVIWMMAGHGLW* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1654 475 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Vra2g1654 475 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 214 229 - -
Vra2g1654 475 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 345 360 - -
Vra2g1654 475 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 360 376 - -
Vra2g1654 475 Pfam FAD binding domain 339 409 IPR002938 GO:0071949
Vra2g1654 475 Gene3D - 61 438 IPR036188 -
Vra2g1654 475 PANTHER - 1 474 - -
Vra2g1654 475 PANTHER ZEAXANTHIN EPOXIDASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 474 - -
Vra2g1654 475 SUPERFAMILY FAD/NAD(P)-binding domain 60 430 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1654 Vra-Chr2 24688885 24695096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1654 55 372 Miscellaneous Gene Families AT4G38540 26.048 1.56e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1654 K09838 - gmx:100778602 796.193