Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1646 ATGGATGCCACTCACTCCATGTTCTGCAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTCGTGTCACATATCTTCAACGTTGTGTTTAGGACTGTGGGTCAACCTGGACCAATTGCGCAGATTCTGGCTGGGTTGGCGCTAGGTCCAATGTCACACATTCCGTATATAAAGGCTACATTTTTTCCTGCTAGCTCAATAAACTACTATGAAGTTGTGAGCTTCTTCTGTCGCATAAACTTCATGTTTTTGTTTGGGTTAGAGATGAATATGCACTACGCAATGCGCAATCTGCGTAGGGTAAACTTTGTAGCTTGTGGTGGTGCCTTGATGGGTGCTGTTTTTGGTCTATCTGTCTCATTTTACTTGCATCAAGAGCTAAACACCCTTGACAATGCCCCTTTGTATTATTTTTCAATGATCATCATGCTAGTGGTGTCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCAGAGTTGAGGTTTGCAGCATCAGACGTGGGGCGAACGGCGGTGTCATCTGCGTTGGTCACAGAAATGGGGTGCTTGTTGCTCTTCAACGTCATGGTTAACTGGAGAAAAGAAAATCACATTTCTTCTGGTTTCCTTTGCCTTGTAATCACTGTCGTGGTGGTTTACCTTAACCGGCACTTGGCAGTTTGGTTAAACGCAAGAAATAGAAACCAGAAGTACCTCAAGGCTCCTGAGTTGTTACTCATTCTGTTCATACTTCTGACTAGCTCAATGATAATAGAGATTTGTGGTTACAACAGTATTATTAGTTGTTTCACCATTGGTTTGTTGTTCCCCAAGGAAGGGAAAACAGCTAGAACATTGCTGCACAAACTTGGTTATTCTATTTACAACTTTGTGCTTCCGGTATATTTTGGCTACTTGGGGTTGCAGTGTGACCTGATAAATGTCTTCAAGAGCTTGCAGCGTGTGGCCAATATGGCCATATTGATATTATTGAGCATTGGAAGCAAGCTTGGTGGAACTCTTATAGCTACCCGCTACCTCAAAATTCCCACAAGTGAAGGTATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCCGACCTTCTATTCATTGGTGCAGCAGCAAAACAAGTAATTACTTTCGATTCGGAAGCGTACAATGTTCTGTTGGTATCAATAGTACTCAACACAATAATATCAGGAGTAGTTGTGGCTTTTCTAGTCAGAGGGGAAGACAAAATGTTTACAAGCAACTACACTGCAATTGAACCACAACAAATGGAAGATGAGCTCCGAATTCTGGCTTGTGTGTATGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTGCTAGCAATACATGGCTCTGGAGTATCACCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACTTGTTGTACCATGAGAAAGAAACTGCTGACCTTAGCGACGATGAGGACTATGGGGGCAATGATGTGGTGGAAATCAACAATTCTTTGGATACCTTCACTGCAGAAACAAAGATTCTAGTCCACCAAAGAAGGGCAGTGTCTTCTTTCCCGTCCTTGTACGAAGATGTGTGCAATGAAGCAGAAGATCTCCAAGTGTCAATTGTGCTACTCCCATTCCACAAGCACCAACGCATTGATGGGAAATTGGAAAGTGGAAAAGAAGGTATAAGGATTACCAACCAGAAGGTGCTAAGACACGCCCCTTGTTCAGTTGGTATAATAGTGGAAAGAGGCCTTGCAAGGGTACCTGGCTTCTCACAGCTAGTAGCATCTGAAGGCATACAAAACATTGCAACACTTTTCTTCGGTGGCCCTGATGACCGTGAGGCTATTGCATGGAGCCTACGCATTGCAGGAAGTCCACGCGTGAACTTAACGATCATAAGATTTTTGCTGACTTCTTCATCACAGAACGAACAGATAGAGAGTGGACAATCAGAGGAAAAGGAAATTTTGATGTCACTGTCTGGGGAGGAGACAGTGAATGAGATTGACAACACATTCATGGTGGACTTCTACAACAGGTATGTGACTTCAGGCCAAATAGGGTATGTGGAGAAGTTTGTGAAGCATGGAGCAGAAACGGTGGATGCTTTGAAAGAGATAGGGGACATGTATTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGGCAAAGTTCACTGACAATTGGTATGAGTGACTGGGAAGAATGCCCAGAACTGGGAACTGTTGGTGATGTTTTGGCCTCTTCAGACTTCGATATTCATGGCTCAGTTTTGATTGTTCAGCAACATAGAGATGTCAAGAAAGGCCTGTTGCATGATTAG 2349 0.4342 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHIFNVVFRTVGQPGPIAQILAGLALGPMSHIPYIKATFFPASSINYYEVVSFFCRINFMFLFGLEMNMHYAMRNLRRVNFVACGGALMGAVFGLSVSFYLHQELNTLDNAPLYYFSMIIMLVVSYTSSPMVIRLAAELRFAASDVGRTAVSSALVTEMGCLLLFNVMVNWRKENHISSGFLCLVITVVVVYLNRHLAVWLNARNRNQKYLKAPELLLILFILLTSSMIIEICGYNSIISCFTIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLQRVANMAILILLSIGSKLGGTLIATRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDSEAYNVLLVSIVLNTIISGVVVAFLVRGEDKMFTSNYTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSGVSPSTTYLMHLIELVKKIKSNLLYHEKETADLSDDEDYGGNDVVEINNSLDTFTAETKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIVLLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGIIVERGLARVPGFSQLVASEGIQNIATLFFGGPDDREAIAWSLRIAGSPRVNLTIIRFLLTSSSQNEQIESGQSEEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKHGAETVDALKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDVKKGLLHD* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1646 782 Gene3D - 19 418 IPR038770 -
Vra2g1646 782 PANTHER CATION/H + ANTIPORTER 21 772 - -
Vra2g1646 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra2g1646 782 PANTHER CATION/H(+) ANTIPORTER 1 21 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1646 Vra-Chr2 24621263 24624143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1646 11 782 Antiporter Super Family AT1G79400 39.103 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1646 - - gmx:100804522 1392.1