Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1603 ATGGAATCTGACAGTGGTAAACAGCAGCAAAAGGACACATTTGGATGCTTCAAGTTGGTTGCCTTAATTGCTCTATGCTTTGTTTTAGTTTCTCCAGCAGAATCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGATATTTGGCCACTGTGACATTGTTTAACTTCCAATTGTACCGCAATATTATGAATCCTGGGTGGACTCTGGGGTGGACATGGGCAAAGAAAGAAATAATATGGGCCATGATGGGGGCTCAAGCCACAGAGCAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCACAGCTGCAAGAGGGACCCTCAAGTTGTTGACTTGCTACCTGGAGCTCCTTTCAACATGCAGTTCACCAATTGCTGCAGGGGTGGTGTGCTTACATCTTGGGGACAGAACCCTTCAGGTGCAGTCTCTTCATTTCAGATTGGTGTGGGGCTCTCTGGCACCTCCAACAAGACAGTCAAATTGCCTAAGAACTTCAAATTGTTGGGACCTGGACCAGGATATTCTTGTGGCCCTGCTAAGGTTGTTCCATCCACTGCAATCCTCACAGATGATCGAAGGCGAAAAATGCAGGCATTGATGTCTTGGAATGTGACATGTACTTATTCACAGTTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAATCACAGGTTGTCCACCTTGTGCTTGTGGTTGCCAGAATAACGATACTTGTGTCACGAAAGACTCAAAGATCCTGCAAGAGAACGTCACCTCAACTCATCGAAAATCAGACATCACACCAAAACCATTGTTACAGTGCACACACCACTTGTGTCATGTCCGGGTGCACTGGCATTTGAAAGACAACTATCAAGACTATTGGCGTGTCAAGATTGCCATTATCAACTTCAACTATCGATTGAATTTCACCGATTGGTCTCTTGTTGTGCAACACCCCAATCTCAATAATGTAACCCAAGTCTATAGCTTTGAATACATGCCACTCCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAACGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTTCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGTTGGGCATTTCCTAGGAGGGTCTACTTTAATGGTGATGAATGCATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGCCCACAAACCACCAACAACTCTTAAATTGATTGCAACCTATGTGGTTTTCACATTATTTTTTCATTTGATTGTAACACATTTTTGA 1371 0.4347 MESDSGKQQQKDTFGCFKLVALIALCFVLVSPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGNCAKFKLKIPHSCKRDPQVVDLLPGAPFNMQFTNCCRGGVLTSWGQNPSGAVSSFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKVVPSTAILTDDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKITGCPPCACGCQNNDTCVTKDSKILQENVTSTHRKSDITPKPLLQCTHHLCHVRVHWHLKDNYQDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKPPTTLKLIATYVVFTLFFHLIVTHF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1603 456 PANTHER COBRA-LIKE PROTEIN 5 456 - -
Vra2g1603 456 PIRSF COBRA 8 454 IPR006918 GO:0010215|GO:0031225
Vra2g1603 456 PANTHER PROTEIN COBRA 5 456 IPR006918 GO:0010215|GO:0031225
Vra2g1603 456 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1603 Vra-Chr2 24014324 24016934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1603 17 450 COBRA Gene Family AT3G02210 56.979 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1603 - - gmx:100813134 919.457