Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1602 ATGGAACACAAAATGTTACCTGCCATTGGATCTGTTGTCCCTCGTGGTTTTTTTGCAGTCTTGCTCCTGCTGTTCTTTTTCTCCTCATTCAGTTCTACAGAAGCCTATGATCCGCTTGATCCAACTGGCAATATAACAATCAAATGGGATGTCATTAGCTGGACTCCAGATGGCTATCTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCACATTCAGTCCCCTGGATGGTCATTAGGGTGGACATGGGCTAAAAAAGAAGTAATTTGGAACATGATGGGAAGCCAAACCACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCAGGTATTCCTCATTGTTGTAAGAAGGACCCAACAGTGGTGGATTTACTGCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCCAGTAGTGCAGTAAGTTCTTTCCAGATTAGTGTTGGTTCTGCTGGAACCACAAACAGAACGGTCAAACTGCCTAAAAATTTTACCCTCAAAGCACCAGGACCTGGCTACACTTGTGGTCCTGCAAAGGTTGTGAAACCAACTACATTTATTACCAGTGACAAGAGGAGAACCACCCAAGCCATGATGACTTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGACTCCGAGTTGTTGTGTTTCCCTTTCATCCTTCTATAATGACACAGTAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAATCTGGCAGCTGCGTAGAACCAAATTCACCGCATTTAGCTTCAGTTGTATCAGCATCAGGCAAAGGTGCAAACACACCTTTAGTTCAGTGCACCAGCCACATGTGTCCTATTCGAGTGCATTGGCATGTGAAACTCAATTACAAAGAGTACTGGAGGGTGAAGGTCACAATTACTAATTTCAATTACAGAATGAACTACTCTCAGTGGAACCTTGTTGTGCAGCATCCCAATTTAGATAATATTACCCAGCTCTTCAGTTTTCAGTACAAGTCACTAACACCCTATGAGGGCTTGAATGATACAAGTATGCTGTGGGGAATCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGACCTCTTGGGAACGTTCAATCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCATTCCCGAGAAGGATTTATTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCTTGGCTGCCAAATGCAAGTTCTAAACTAGTTTTCTCTGTGCTAAGTACACTCATAGCCACTTTAGCTTCTTTGTTAATTGTTATTTAA 1356 0.427 MEHKMLPAIGSVVPRGFFAVLLLLFFFSSFSSTEAYDPLDPTGNITIKWDVISWTPDGYLAVVTMYNFQQYRHIQSPGWSLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSSAVSSFQISVGSAGTTNRTVKLPKNFTLKAPGPGYTCGPAKVVKPTTFITSDKRRTTQAMMTWNITCTYSQFLAQKTPSCCVSLSSFYNDTVVNCPTCTCGCQNKTESGSCVEPNSPHLASVVSASGKGANTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYSQWNLVVQHPNLDNITQLFSFQYKSLTPYEGLNDTSMLWGIKFYNDFLSSAGPLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSVLSTLIATLASLLIVI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1602 451 PIRSF COBRA 11 451 IPR006918 GO:0010215|GO:0031225
Vra2g1602 451 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Vra2g1602 451 PANTHER PROTEIN COBRA 11 449 IPR006918 GO:0010215|GO:0031225
Vra2g1602 451 PANTHER COBRA-LIKE PROTEIN 11 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1602 Vra-Chr2 24010712 24014209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1602 47 438 COBRA Gene Family AT5G60920 80.253 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1602 - - gmx:100815779 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1958 7 39052398 39056493 Vra2g1602 2 24010712 24014209 PCT