Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1598 ATGTATAGTCAAGTGAATCGTGGTTCTCATTTCGGGCAGAGTCCCGTCCCTCCGGTGCTGCCGCCCCCACCACCACCGCAACCACCACCGCAGTATCAGCAGGCTCCGCCGCATTTCCATCAGTTCCCACCCCCTAACGTTGGTGGTCCTCCTCCACCACCGCCTAACGTTGGTGGTCCACCACCACCTCCACCACCCCCTCATCATGTTTATTTAAATGGACCTCCCCTTCCTCCTCCTCCACCGCGTCCTAATGCGTCTTCCCCAATTCCCATGAACCTTCCCGTTCAAGGTTCACATAATGTGATGCCAAATGCTGGCCCTTCTCAATTACACCATGGGAGCACCGTGACACCGCAAACATCTTGGGCTCCAGGACCACCGGCTAGAGTATTGCCACCACCACCACCACCTCCACCCCATCCTCCCTCGGCTTCCCAAGGTCAAATTTTGTATAACCCTCCTTTCCATGGTCCACCTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATACTCCTCCACCACCACCCCATTCAACAGGTTATTTCCATTCAACTGTTGGGAATTACCGAGTGCCTCCTGGTATTCCTCCACCGCTGCCGTTGTCTCCACCACCTGCTCTTCCCGCTCCACCGCCTCCTCCTCTTAATGCTCCGGTAACCTCCTCCTCCTCCTCAAGTGTTGCAGATGACCCTCACTCTGTGAAGACTGTGGATTTGGTTGATGGAGTTGTAGCTTCTCTTCCATCTGGTATTGCACCTGTACATGGTTCTGATTCTAAACGGGATGGTCCAAATTGTAGAGAGGTTGCTGATGCTGAAAAAGATGAGGATCTTCCCCCACCTAAGCCAACGGAAGAAAATACTGTACTGAAGATAGAAGCTTTGTGTCAGCTTATTGCTGAGAAGGGAGCTGATATTGAAGATAAGATTCGTCGAGATGAATTTCAAAATCCTGAATATGTATTTTTGTTTGGCGGAGACCCAGGAACTGAGGCTGCAATTTCTAACACTTATTTCCTGTGGATGAAGAAGAAATATAATTTAGATACTGGGTGGCATGAAAAGAAAAGGCAACCAGAGAGAGTGTACTCTTCAGGTGAGCAGTATAACCTGCATGTTGCAACTGCGAGTGCTGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAACTATGCAACTGAAGCCCTAAATCAAGATGATGAAGTGTTTAGAGTGAATCATAATATAGCGCAGCCGCAGAAATTATCAGAGAATGACCCTGCCAGGGTCATCTCATCCTGCAGTCCATCATACTTTGGATCCATGGGAGTCAGCAAACAGAATGAAGGACCCGAGATTTTATCTTATCTGGAGCACAGCAAATCTATAAGACCAGTTACCAAGGTTCAAAGTCTTGAGAATAACTCCACTGAAGTGGCTGAGTTATCCTTGGGCAAGGCTTTGGAGGAAGCTGCAACTTGTGTTGATGATGATTTTGTTTGTACTGTTACTTCTGATCACAATAAAACCGCTACTACTAATAAGGATTATGGGACACTCCTAGCGAGTGACAGCCCTATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGGGGATGAAAGCAATGCTGCAGAAGCTAACGTTTTCACAATCTCAGAAGGTATTGATACTGGTGTTTCAGCAGTCCATAAAGATTCTGGGAGTCATATGGAGATTGGTATTGGATCTAAGAGTCCCACAAGTACTCAAAAGGGGTTTGGGTCACTCTCCAGAACATCACAGGGTGGTTTAGAAATATCTACACATTTATTACAAGAGTCTAAGAAAACTCGCAACCGAAAAAAATCTGTCTCACGTTGGAGTAGTGATGGATGTGTTGACCATAACCTTGAAAATCAGATGTCTGTTAATTTTGCTTCATCAATGGAAGCTTCCAAGGGCAAAGATAGATTAGAGGATACTGCCATTGACAGTGGTAGTAGAAGTGGTAATGCTGAAAAGAAAGATGAGGGGAAAACCTCAAAATTTGAACTAAATGTTATGAAAGTGGATGAATTCGGAAGACAACTAAGAGAAGGTCTTCCAGATAGTGATTCTGATGATTCATTCCATCAGCGGACAAGGAGGCTTAATAAAAGAGATAGAAGAAGCTGGAGCCGCAGCCAGTCTCCTCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCTCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCAGCACCGAAGAAGCAGTAGGTCACCAATCTCAAGACGGTCAGGTGACTTTCGTGGTGAGAATGTTAAAAGGGACAGGGATCAGTGCTTTGACTTTCTTCGAGGAAAGTGCTATCGGGGAGCATCTTGCAGGTACATTCACCATGAATCTGACATGAATGCTACTTCAAGGCGCTATAAGAATAAACATGATCTGGAAGTCAGTTATTGTGGAAAAGAATCAAAGACTAATGGAGACACGACGAAGATTTATTCTAAAGTGTTTGATAATGAGCATGATGAGGTTAGAAGTCAGGATGATGATCTTAGTCTGAATGTGACTAGCCAGGAAGTAGTGAAGAAAAAAGAAGATTCAGGGTGGAATGTTGTTGCATCAACTATCATTCATCTTGATGGCCAATCAGTTAATAGCAATCTAGGTAAATCTAAATCTATCAGAGAGGTTGCTCCTGAAATGCAGGAAACCATTGATGTGAGGGAGGATCCAAGGAATTCAATCCATGGGAATGATAGTTCGGAAGCAGGTGATTCTCAACAGCAACACATAGTTGAAGGCTTTCACCCTGATGCTTTAGGCCATGATAATACTTCTAAATCATCTGGTACATATAAAGATGTCATTCCCTCAGGAGATGGTCTTTTTGCTCAGAAAAGGCAACTCAGTGTTTCTGCTGCTGGAATTCAGGAACAATCGTGTTATCCATCTCAGCATGTAAATGCATCCTCTGTGACTGATGCATCACCGGATAAAAGATCAACTGTTTCTACTAGTGTTACTGAAGTTCCTGACAGTGTCACATCAGAGCAGGCTTCATTGAACCCTCAGGTTTCAAAAGAGTTACCTCCACAGTGTGACTCTTCAGTGGAATTTCCACGTCATAATTACCAGTTGTCTGCACCTGTTGTTTCACATTCCCCTGGCGAAAATCCTGTGCACATGCCACAAATTTCAAGGCAGTATAATGTGATGCAACAGAGGGCATTCTTTCCTTTCCAATCCACTGCCAGAGAAAAGTTTGAACCTTACCCAGCTCCTTTACACATGCATAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCATTGCCATTACCACCACCACTGCCACCGCCACCATCACTGCCACCACCGCCATCAAGAATGGTGTATGATCCCAATGTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTTATTCAGAGTCAAATGCATTCAAGAACTGACTTTGTTTCCCAGACATCCATGAAGCCTTTACCGAGTTGCTCTGAGAATTCTGATTTTCAGGATATAGCATACCCTCCTATGCAGGATCATTCACGGACTTTTATGCTTACTGAACCTTTCTCTCCAAAGCAACTTCCTCAAGGGAACCCAGCTAGTCAATTACTTTCAGGATCTAGTCTCAACGGAGATGAATTTCATAATCAACTTCCATTGCAGGATTCAAAATTTTCCAGTGCCACATCATTTGGCAGCTTGCAGCCTCAACAAAATGAATTTTCCTGGAAATCGGATGTGAACAGACTACAACCTTCTCTGGGTGGCAAGTTACCCGCGGAAGGACATTTTATGACATCCTCAAACATTGATTCATCATCACAGAAGCAACAATCAATGTACAATTTTCAGTGTTCTGTATCCGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTCAATTTCTGGATAGCAGTCATTCAACTTCTCTTCCACCGTATAGTGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTTAGTTCAAGTATTTTTAGACAGGAAAATGAAATAGTCCATGGTAACAATTATGCTTCTTCTAGATTGAACCATACTACGGTAAATGGGGAGGGTGATGGTGGGGTTGGATCAAGACATTCAGCATCTGCACCAAAATCAGGTAGAGCTCTTGGTCAGATTTTGCCTAGGTCTGGTGGTGACCAATATGATCCACTTTTTGACAGCATTGAACCATCATCCTCTTTGAGAAAAACTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAATGTCAGCCTAAGGCCCAAAAGTTCTTACATTTCTTTGGATGTGGATGAGAAAAACAAGGAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATACAGTGAGACAGCGGATGCAGAAGTTGGTGCTATTGAAAATGAGAGCGTAAGTGATGATGTGGATGTTGCAAAAGTGACTACAAAGGAGGTTGAGATTAATCGGGTCAAGTCTCCTGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCAATGAAATTGTTCAAAGTTTCCATTGCGAACTTTGTAAAGGAGGTTTTGAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTTAAAACCATTGTGAAAAAGACCGTGGATAAAGTGTCAGGAGCCATGAAAGGCCATCGTGTACCTAAGTCCCAAGCGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTGAAGGTATGA 4872 0.4368 MYSQVNRGSHFGQSPVPPVLPPPPPPQPPPQYQQAPPHFHQFPPPNVGGPPPPPPNVGGPPPPPPPPHHVYLNGPPLPPPPPRPNASSPIPMNLPVQGSHNVMPNAGPSQLHHGSTVTPQTSWAPGPPARVLPPPPPPPPHPPSASQGQILYNPPFHGPPLQPGDVQNLHNTPPPPPHSTGYFHSTVGNYRVPPGIPPPLPLSPPPALPAPPPPPLNAPVTSSSSSSVADDPHSVKTVDLVDGVVASLPSGIAPVHGSDSKRDGPNCREVADAEKDEDLPPPKPTEENTVLKIEALCQLIAEKGADIEDKIRRDEFQNPEYVFLFGGDPGTEAAISNTYFLWMKKKYNLDTGWHEKKRQPERVYSSGEQYNLHVATASADSDMEMEDDITLSDKDQGSNYATEALNQDDEVFRVNHNIAQPQKLSENDPARVISSCSPSYFGSMGVSKQNEGPEILSYLEHSKSIRPVTKVQSLENNSTEVAELSLGKALEEAATCVDDDFVCTVTSDHNKTATTNKDYGTLLASDSPIRLLQDYASDDTSANGDESNAAEANVFTISEGIDTGVSAVHKDSGSHMEIGIGSKSPTSTQKGFGSLSRTSQGGLEISTHLLQESKKTRNRKKSVSRWSSDGCVDHNLENQMSVNFASSMEASKGKDRLEDTAIDSGSRSGNAEKKDEGKTSKFELNVMKVDEFGRQLREGLPDSDSDDSFHQRTRRLNKRDRRSWSRSQSPPDRRSRRNRRSPRRRRDKRNRSRSWSPQHRRSSRSPISRRSGDFRGENVKRDRDQCFDFLRGKCYRGASCRYIHHESDMNATSRRYKNKHDLEVSYCGKESKTNGDTTKIYSKVFDNEHDEVRSQDDDLSLNVTSQEVVKKKEDSGWNVVASTIIHLDGQSVNSNLGKSKSIREVAPEMQETIDVREDPRNSIHGNDSSEAGDSQQQHIVEGFHPDALGHDNTSKSSGTYKDVIPSGDGLFAQKRQLSVSAAGIQEQSCYPSQHVNASSVTDASPDKRSTVSTSVTEVPDSVTSEQASLNPQVSKELPPQCDSSVEFPRHNYQLSAPVVSHSPGENPVHMPQISRQYNVMQQRAFFPFQSTAREKFEPYPAPLHMHNAHFNVPPNSSWTSLPLPPPLPPPPSLPPPPSRMVYDPNVNSGVVKSYISSEFIQSQMHSRTDFVSQTSMKPLPSCSENSDFQDIAYPPMQDHSRTFMLTEPFSPKQLPQGNPASQLLSGSSLNGDEFHNQLPLQDSKFSSATSFGSLQPQQNEFSWKSDVNRLQPSLGGKLPAEGHFMTSSNIDSSSQKQQSMYNFQCSVSEANLGVPGETATVSRYPPQFLDSSHSTSLPPYSGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIVHGNNYASSRLNHTTVNGEGDGGVGSRHSASAPKSGRALGQILPRSGGDQYDPLFDSIEPSSSLRKTDFDQKQEVTGESNVSLRPKSSYISLDVDEKNKEEEVGAVASTTSQNNDEYSETADAEVGAIENESVSDDVDVAKVTTKEVEINRVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV* 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1598 1623 MobiDBLite consensus disorder prediction 1208 1267 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 1386 1495 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 697 776 - -
Vra2g1598 1623 Gene3D Surp module 266 350 IPR035967 GO:0003723|GO:0006396
Vra2g1598 1623 MobiDBLite consensus disorder prediction 574 599 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 910 935 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 192 219 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 579 599 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 249 286 - -
Vra2g1598 1623 SUPERFAMILY Surp module (SWAP domain) 273 346 IPR035967 GO:0003723|GO:0006396
Vra2g1598 1623 MobiDBLite consensus disorder prediction 90 123 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 1 233 - -
Vra2g1598 1623 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1623 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 1479 1494 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 15 89 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 910 924 - -
Vra2g1598 1623 PANTHER EXPRESSED PROTEIN 1 1623 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 697 714 - -
Vra2g1598 1623 ProSiteProfiles Zinc finger C3H1-type profile. 780 807 IPR000571 GO:0046872
Vra2g1598 1623 MobiDBLite consensus disorder prediction 651 679 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 993 1040 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 736 758 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 612 632 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 261 283 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 126 145 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 649 679 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 612 627 - -
Vra2g1598 1623 MobiDBLite consensus disorder prediction 993 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1598 Vra-Chr2 23976781 23986745 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vra2g1598 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1598 - - vun:114164511 2634.37