Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1590 ATGGAGGAACATAAACCTGTTATCTCCACTTGTGAACAAGATCAACACGTGGTTGCTGCTGCTCAACACATTTTAAAGGCACTAGCAGCCAGTAAGAATGTGTCCAGTGACTTGAGAAAAACCCTCTTGGATGTTGAGTCCCAATTGTCCGCAATTTCCATAGTCAATGAGAGGAAAGGAAGGGGTATCAGGCCATTAGAGAACCGGCTCAAGTGTGTTGAAGACAAGGTAACGAGGTGGATAGCAAACCCTTCCATGACATGGGACTCTAGTCCCAATCAGTCTTCAGACTATTTGAAAGTTGTTGGTGAAATCCAAACACTGATTCAGAGTTTGGAAAGCTTTTCTGTGGTGAATGATAATTGGAGGCAGAAGGAACTTCTTGAGAGAGCATATGCAGTTTTGCAGGATGCTATGTCCAGGCTTGAGAGAGAATTAGACCACATTCTTGTTGAACATAAGCAGTACTTTGAGCCTGAATACATGTCTTTCGATTCTAAAATGGATATGGCATATGATGAATCATTTCGTGAAGTGGAGGATGAACAAGTTAACGAGGTCAGCAGGAGTACCGGTTCTAGCCAATCCGAGGCCAACATTGTTGATCTGATGAATCCAGCAGTACTTGAGTATCTCAAGAGCATTGCAAATGTCATGTTTGACTCAAAATACCATCAGGAGTTCTGTCAGGTCTTCATTTCATCCAGAAGGAATGCCTTGGCTGAGTATTTTGTTACTCTTAAGATGGAAAAATTAAGCATTGAGGATGTGCTGAAACTGGAGTGGCAGTGCTTGAACCATGAGATGAAGAAATGGATACGAGCCATGAAGATCATTGTTCAGGTGTATCTTGTCAGTGAGAAAAGATTGTGCAAACACATCCTTGGGGACTTTGGATCCTTTTATCAGTGTTGCTTTTCTGAAATTTCTCAGAGTTTTATGCTTCTCCTTTTGAATTTTGGAGAGGCCGTGGCAATGGGAGCACACGCCCCAGAAAGAATATTTCGTTTGCTTGATATGCATGAGGTTTTGGAGCATCTTTCAGTGGATGTAGATAAATTGTTCTTTGAAGAAGTTGGTGCTTTTGTCAGAGGAGAGTTTCACAAGCTTCTAACGAGCATTGGTGACACTATTAAGTCTACATTTCTGGCATTCAGAAATGCTATTGCAACTAACAATTCAAAGACTCCTTTTCCTCAAGGGGGTGTTCACCATGTTACCAAGTATGTGATGAATTACATCACGACACTAGTTGAATATGGTGACACCCTTAATCTCCTTCTTGTTGAAGAATGTTCAACTGATCCTGCAGTCTATAAACAAGAAACATCAGCTCTGTCACTCTGTCCAGTGGCCTTCTACTTTCGGTCAATCACCACAGCTCTAGAATCCAACTTGAGCAACAAGTCCAAACTATACAAAGATGTAGGTTTGCAACATATTTTCATGATGAACAACATTCGTTACATGGTGCAAAAGGTGAAGTGCTCTGATCTAAGCCACTTTTTTGGAGACTGCTGGCTTCGGCAGCACACTGCTGAGTATCAGCGCGATGCAAGGTGTTATGAGAGAGTGACTTGGGGTCCAATACTTTCTATGCTTAAGGTTGATAATTTGCCAAATTGTGTTTCACCCAGAACTTTGGAGAAAAGCTGCAAAAAGTTTTGCAATGCCTTTCGTGAAGTGTACAGGACCCAGACGGGGTGGTGCATCCAAGACTCTCAACTTCGTGAGGATCTACAAATTTCTGTGTCTCAGAAAGTGGTTCTTGCATACGGATCATACACTGGAAGAAACTCATTAAACATTGCAGATAAGTATATCAAGTACACTGTTGAGGATCTACAAACTTATATTTTGGACCTTTTTCAAGGGTCGCCAAAATCTTTGCACTACACTCAGCAAAGAAATTGA 1914 0.4154 MEEHKPVISTCEQDQHVVAAAQHILKALAASKNVSSDLRKTLLDVESQLSAISIVNERKGRGIRPLENRLKCVEDKVTRWIANPSMTWDSSPNQSSDYLKVVGEIQTLIQSLESFSVVNDNWRQKELLERAYAVLQDAMSRLERELDHILVEHKQYFEPEYMSFDSKMDMAYDESFREVEDEQVNEVSRSTGSSQSEANIVDLMNPAVLEYLKSIANVMFDSKYHQEFCQVFISSRRNALAEYFVTLKMEKLSIEDVLKLEWQCLNHEMKKWIRAMKIIVQVYLVSEKRLCKHILGDFGSFYQCCFSEISQSFMLLLLNFGEAVAMGAHAPERIFRLLDMHEVLEHLSVDVDKLFFEEVGAFVRGEFHKLLTSIGDTIKSTFLAFRNAIATNNSKTPFPQGGVHHVTKYVMNYITTLVEYGDTLNLLLVEECSTDPAVYKQETSALSLCPVAFYFRSITTALESNLSNKSKLYKDVGLQHIFMMNNIRYMVQKVKCSDLSHFFGDCWLRQHTAEYQRDARCYERVTWGPILSMLKVDNLPNCVSPRTLEKSCKKFCNAFREVYRTQTGWCIQDSQLREDLQISVSQKVVLAYGSYTGRNSLNIADKYIKYTVEDLQTYILDLFQGSPKSLHYTQQRN* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1590 637 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 23 630 - -
Vra2g1590 637 Coils Coil 125 152 - -
Vra2g1590 637 Gene3D Exocyst complex component Exo70 84 632 - -
Vra2g1590 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 630 IPR004140 GO:0000145|GO:0006887
Vra2g1590 637 SUPERFAMILY Cullin repeat-like 89 623 IPR016159 -
Vra2g1590 637 Pfam Exo70 exocyst complex subunit 270 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1590 Vra-Chr2 23857660 23860804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1590 1 624 EXO70 exocyst subunit family AT5G61010 41.905 3.70e-170 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1590 K07195 - gmx:100791622 981.859