Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1588 ATGAGTGGTAATGGAAGGAAGAGGCGCCATTTCAGCAGAATCCATGCATTCTCTTGTGGGAAAGCTTCATTCAAAGGGGAGCATTCACTTATAGGGGGTCCTGGATTCTCAAGGATAGTGTACTGCAACGAGGCAGAACGTGGTGAGGGGAGTTTTGTGAGTTATGGTGACAATTATGTGAGTACTACTAAGTATACAGTGGCTACTTTCCTACCCAAGTCCTTGTTTGAGCAATTCCGGAGGGTGGCCAATTTTTACTTCCTTGTCTGTGCAATTCTGTCTTTTTTCCCGGTTTCTCCTTACTCGGCTGTCAGCAATGTTATTCCTCTTGTTGTTGTGGTTGCTGCTACAATGGGGAAAGAGGCTGTTGAGGATTGGAGGAGGAAGAAGCAGGATATAGATATGAATAATAGAAAGGTTAAAATGCACCATGGAGATGGTGTTTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGAGACATAGTAAAGGTTGAAAAGGATGAATTTTTCCCTGCTGATTTAATCTTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGGGAAACAAATCTAAAAGTTAAACAAGCACTTGAAGAAACATCAAAGCTGCAAGAAGACTCAAGCTATCAAAATTTCAAGGCTATCATCAAATGCGAAGATCCAAATGCAAATTTGTACTCATTTGTAGGCAATTTGGAGCTTGAAGATCAATTGCATCCTCTAGCACCTCAGCAGCTGCTGCTTAGGGACTCAAAGCTAAGGAACACTGAGTTTATCTATGGTGCGGTAATCTTCACAGGCCATGATACAAAGGTTATGCAGAATTCAACAGAACCTCCTTCCAAGAGAAGCACAGTTGAGAAACGGATGGATAAAATTATTTACTTTCTCTTCTTTGTCTTATTTTTAATATCTTTTGTTGGTTCAATTTTCTTCGGGATAGCAACTAGGGAAGACCTTGAAAATGGAGTTATGAAGCGATGGTACCTCAGACCAGATAATACCACAATTTACTTTGATCCAAAGAAAGCACCAGTTGCAGCAATGCTGCATTTCTTGACTGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTCTGTACGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAGGATTTGCATATGTATTATGAGGAAACTGACAGGCCAGCTCATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGACACTATACTTTCAGATAAAACAGGAACTTTGACTTGCAACTCTATGGAATTCGTCAAGTGTTCTATTGCTGGGATTGCCTATGGCCAAGGAGTTACAGAAGTTGAGAGAGCTCTAGCCAAGCAAAAAGGATTACCTATAGGTGAAGAGTTGACAGAAGATGGCTATGTTCCAAAGACTTCTGAAGTAAAGTCTTCCGTTAAAGGTTTTAACTTTATGGATGAAAGGATCACAAAAGGAAATTGGATCAATGAACCTCATGCCGATGTAATCCACAGGTTCCTGCAGTTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAAATGGTAGAGTTTCATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAACTTGGGTTTGAGTTTTATGAAAGGACACAGACAACTATCTCACTGCGTGAGTTCAATCCCAAATCAGGCAAAACAACTGAAAGGTCCTACAAACTTTTGAATATACTAGAGTTTAGTAGCACAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAATTGCTACTATTTAGCAAAGGAGCAGACAGTGTCATGTTTGAACGACTTGGAAGGAATGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTGATGAATATGCTGATGCTGGTCTGAGGACCTTGATACTTGCATATCGGGAACTTGGTGAAGAAGAGTACAATATATTCAATAAAGAATTTATGGAGGCCAACAACTTAGTAAGTGCAGATAGAGAGCAAATTGTGGAGGAAGTATCAGAAATGATTGAGAAGGAGTTAATTCTTCTTGGTGCTACTGCGGTTGAAGACAAGCTTCAAAATGGGGTTCCTGAATGCATCGACAAGCTAGCTCAGGCAGGAATTAAGCTATGGGTTCTGACTGGTGATAAAATGGAGACAGCAATCAATGTTGGCTATGCATGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATCAGTTCAGAAACTCTAGAAATCAAATCATTGGAGAAAGTGGAGGACAAGTCTGCTGCAGCAGCGGCAATCAAGGCAAGTGTTATTCTTCAACTAAAGAAAGGAAAGGAATTACTTGCTGAATATGATGAAAACTCCGAGGCATTAGCTCTTATCATTGATGGGAAGTCTCTCACTTATGCACTAGAAGATGATGTGAAGGACCTTTTCCTTGCACTTGCTGTTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTCGTTACTAGACTGGTAAAGGTTAAAACTTGTAGCACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCTGACATTGGGATTGGCATAAACGGTGTCGAAGGAATGCAGGCAGTTATGTCCAGTGATATTTCCATTGCCCAATTTCGGTTTCTAGAGCGTTTACTACTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAACATTGCCTTTGGCTTCACCCTCTTCTTCTATGAGATCTACGCCTCGTTCTCAGGGCAAGCTGCATACAATGATTGGTACCTCTCACTATATAACGTATTCTTCACTTCCCTTCCGGTAATTGCCTTAGGAGTATTTGACCAGGATGTTTCTGCTAGATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTGCAAAATGTGCTGTTCAGCTGGAAACGGATCCTCGGTTGGGTATTTAATGGAGTATTGAGTGCTACCGTAATATTCTTCTTCTGCATCAACGCAATGGAGAATCAAGCATTCCGCAAAGAAGGGGAAGTTGCTGATCTGGAAGTTCTTGGTGCAACCATGTACACTTGTGTGGTGTGGGTGGTGAATTCCCAAATGGCACTATCCATCAGTTACTTCACTTACATTCAGCATTTGTTCATATGGGGTGGCATTATTTTCTGGTACATATTCCTGATAGTGTATGGAACAATGGACCCCACTGTATCAACGACTGCCTATAAGGTATTGATTGAAGCTTGTGCACCAGCACCATCATACTGGCTCCTCACTTTGCTTGTGCTTGTTGCTTCACTCCTTCCATACTTGGCCTATGCTTCAATCCAAATGAGGTTCTTCCCCATGTTCCATCAGATGATACAGTGGATTCGAAATGATGGGCAAACGACTGACCCAGAATACGTTCATGTTGTCAGACAGAGATCAATAAAACACACAACAGTTGGCTTCACGGCTCGTTTTGAAGCATCAAAGAGTATTCAAGTTTGA 3567 0.4096 MSGNGRKRRHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSFVSYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVIPLVVVVAATMGKEAVEDWRRKKQDIDMNNRKVKMHHGDGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKVKQALEETSKLQEDSSYQNFKAIIKCEDPNANLYSFVGNLELEDQLHPLAPQQLLLRDSKLRNTEFIYGAVIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFFVLFLISFVGSIFFGIATREDLENGVMKRWYLRPDNTTIYFDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGQGVTEVERALAKQKGLPIGEELTEDGYVPKTSEVKSSVKGFNFMDERITKGNWINEPHADVIHRFLQLLAVCHTAIPEVDEENGRVSYEAESPDEAAFVVAARELGFEFYERTQTTISLREFNPKSGKTTERSYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLGRNGREFEEKTKQHIDEYADAGLRTLILAYRELGEEEYNIFNKEFMEANNLVSADREQIVEEVSEMIEKELILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGYACSLLRQGMKQIIISSETLEIKSLEKVEDKSAAAAAIKASVILQLKKGKELLAEYDENSEALALIIDGKSLTYALEDDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKVKTCSTTLAIGDGANDVGMLQEADIGIGINGVEGMQAVMSSDISIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWVFNGVLSATVIFFFCINAMENQAFRKEGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGIIFWYIFLIVYGTMDPTVSTTAYKVLIEACAPAPSYWLLTLLVLVASLLPYLAYASIQMRFFPMFHQMIQWIRNDGQTTDPEYVHVVRQRSIKHTTVGFTARFEASKSIQV* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1588 1188 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Vra2g1588 1188 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Vra2g1588 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Vra2g1588 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Vra2g1588 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 668 IPR023299 GO:0000166
Vra2g1588 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1140 IPR023298 -
Vra2g1588 1188 Gene3D - 110 286 - -
Vra2g1588 1188 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 826 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vra2g1588 1188 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Vra2g1588 1188 Gene3D - 469 701 IPR023299 GO:0000166
Vra2g1588 1188 Gene3D - 702 912 IPR023214 -
Vra2g1588 1188 SFLD p-type atpase 406 913 IPR044492 -
Vra2g1588 1188 Pfam Cation transport ATPase (P-type) 521 624 - -
Vra2g1588 1188 SFLD C1.7: P-type atpase like 406 913 - -
Vra2g1588 1188 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Vra2g1588 1188 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Vra2g1588 1188 SUPERFAMILY HAD-like 419 917 IPR036412 -
Vra2g1588 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Vra2g1588 1188 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Vra2g1588 1188 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1588 Vra-Chr2 23831881 23838205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1588 1 1184 Primary Pumps ATPases AT1G68710 68.966 0.0 1778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1588 K01530 K14802 gmx:100777629 2150.55