Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1574 ATGGCTTCTCCATGGGTTCAAGAGCTCCATATTCATCACTTCACCATTCCTGTAACCATTGATAGAATGTCTTCTGTTATGCCATCAAGGCCTATTCCTGTTAAACCAGGTGACACTTTATACCTTTCCAATCTCGATGACATGATTGGAGCTCGTGTTTTCACACCTACAGTGTATTTTTATCAGTTACACAGCACTGCCTCTTCCCAAAAACCTGTCACAAAAATACTACAATGTGCTCTCGCTGATGTTTTAGTGCCTTACTACCCTTTATCAGGCAGGCTTAGAGAGACGAAGAATGGTAAACTAGAAGTGTTTTTTGGACCGGAGCAAGGAGCACTCATTGTTGAGGCACGATCTGATGTTGCCTTGACTGAATTAGGAGACCTCACAGCTCCGAACCCGGCTTGGGAGCCTTTGATCTTCAAGTTTCCCAATGAAGAACAATACAAAGTCCTGGAAATGCCACTGGTCATTGCTCAGGTGACCCTTTTCCGATGCGGTGGCTTTAGCCTTGGTTTGAGGCTTTGCCATTGCATCTGTGATGGAATGGGAGCCATGCAATTTCTGGGTGCATGGGCTGCTACTGCAAGAACAGGGATGCCGGTTATAGACCCCGTGCCTTGTTGGGACAGGGAAGTTTTCCGGCCACGTGACCCACCGGTGGTTAAATTTCCTCACTTGGAGTTTATGAGAATTGAAGAGGGCTCCAACCTGACAATGACACTGTGGCAAACCAAACCGGTTCAGAAGTGTTACAGGATCAAGCGCGAGTTCCAGAATCGCGTGAAAGCTCTTGCTCAGCCATATGACGCTGCAGGTTGCACAACTTTTGATGCCATGGCAGCTCATATATGGAGATCATGGGTGAAAGCTCTTGATGTGAGGCCACTAGATTACCAGCTTAGGTTAACGTTTTCGGTGAATGCTCGGCACAAGCTCAGAAACCCAGCACTGAAAGAAGGGTTTTATGGAAATGTGGTGTGCGTTGCATGCACAAAAAGCACTGTGTCTGAGCTTGTGCATGGAGAGCTAGCTGAGACAACCCTTTTGGTTCGAGAGGCGAGACAGAGTGTGTCCGAGGAATATTTGAGATCTACAGTGGATTATGTCGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGTGGGAAACTAACAATAACTCAATGGACAAGGTTTTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACACCAACCCCTCAAGTTTGTGTCTTTCTTCCTGAAGGAGAAGCTGATTGCAGTGATGCTTCTATGATCGTCTGCATATGCTTGCCTGAGTCTGCTGCTCAAAAGTTTACACAAGCTTTGTTGCTCCATTCTGATTTTTGA 1383 0.4628 MASPWVQELHIHHFTIPVTIDRMSSVMPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQLHSTASSQKPVTKILQCALADVLVPYYPLSGRLRETKNGKLEVFFGPEQGALIVEARSDVALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMPVIDPVPCWDREVFRPRDPPVVKFPHLEFMRIEEGSNLTMTLWQTKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARHKLRNPALKEGFYGNVVCVACTKSTVSELVHGELAETTLLVREARQSVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSDASMIVCICLPESAAQKFTQALLLHSDF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1574 460 PANTHER F21B7.2 12 456 - -
Vra2g1574 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 456 - -
Vra2g1574 460 Pfam Transferase family 17 452 - -
Vra2g1574 460 Gene3D - 238 454 IPR023213 -
Vra2g1574 460 Gene3D - 15 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1574 Vra-Chr2 23644327 23645901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1574 30 455 Monolignol Biosynthesis Gene Families AT5G48930 30.435 1.15e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1574 K15400 - gmx:100802814 853.588