Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1565 ATGGAAGTATTTAAGATTCTTTTTGTCTTTCTCATCACTCTGCTACTCATCTTCAAGCTCGCACTCTCTTTCTGGTGGAGACCAAGGAAAATTGAATGTCATTTCTCCAACCAAGGAATAAGAGGACCCCCTTATCGTTTCTTCCTCGGAAATGTTAAAGAGCTTGTCGGAATGATGATGAAAGCCTCTTCTCAACCCATGCCTTTCTCTCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAACAAAATTTATGGTTCGACATTCCTGGTTTGGTTTGGACCCACCGTTCGAGTCACCATCTCTGATCCAGACCTCATCCGAGAAATCTTGATCTCCAAGTCAGAATTCTATGAGAAAAACGAATCTCCCCCACTTGTGAAGCAGCTTGAAGGTGATGGGCTCCTGAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAGAATCATCTCTCCCACCTTTCGTATGGAGAATCTCAAATTGTTGATACCGAATATGGCAACAAGCGTGGTAGAGATGTTGGAGAAGTGGAAGACAATGGGCGAGAAGGGTGAAGTGGAAATCGAAGTTTCAGAATGTTTTCAAACCTTAACAGAAGATGTAATAACTAGGACAGCGTTTGGAAGCAGCTACGAAGACGGGAAAGCCGTTTTCCGGTTACAAGCCCAACAAATGGAACTGGCAGCGGATGCCTTCCAAAAAGTGTTCATTCCAGGTTCCAGATTCTTTCCGACAAGGAGGAATTTAAATTCTTGGAAATTGGATAAGAAAATGAAGAGATCGTTGGTGAAGTTGATCGATCGACGAAAAGAGAATGCGTGTGAGAATGAAATTAGAAAAGGAGCGAAGGATTTGCTGGGGCTTATGATTGGAGCTTCCGTAAAGGTTGATGACATGGTGGAAGAGTGCAAGACATTTTTCTTTGCAGGGAAACACACCACTTCGAATCTGCTGACGTGGAGCACTATTCTGCTTGCTATGCATCCCAAGTGGCAGGTAGAGGCACGTGAGGAGGTGGCGATGGTGTGCGGTGCACGTGGCATCCCTACCAAGGACGATCTCGTCAAGCTTAAGACATTGACGATGATCGTCAACGAGTCTCTAAGGCTGTACCCTCCGACCATCGCAACCATCAGAAGGGCGAAAGCTGACGTGGAGCTAGGGAAGTTCAAGATCCCGTGCGGGACGGAGCTCCTCATCCCTATCTTGGCCGTTCATCACGATCAGGCCACGTGGGGCAGCGACGCCAACGAGTTCAATCCTGCCCGTTTCTCCAACGGCGTGTCTGCCGCTGCGCGCCACCCTTTCGCATTCATCCCCTTCGGGCTCGGTGCGCGAACCTGCGTGGGACAGAACCTGGCGCTTCTTCAAACGAAACTGACCCTGGCCATCATGCTTAGCCGTTTCAGTTTCAAATTGGCCCTTACCTATCGCCACGCGCCAACTGTCCTCATGTTGCTCTACCCTCAGTATGGCGCGCCGATCATTTTCCAACCCATTGCCACAACCGCAACCACCGTGGATTGTTGA 1539 0.488 MEVFKILFVFLITLLLIFKLALSFWWRPRKIECHFSNQGIRGPPYRFFLGNVKELVGMMMKASSQPMPFSHNILPRVLSFYHHWNKIYGSTFLVWFGPTVRVTISDPDLIREILISKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFRMENLKLLIPNMATSVVEMLEKWKTMGEKGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMELAADAFQKVFIPGSRFFPTRRNLNSWKLDKKMKRSLVKLIDRRKENACENEIRKGAKDLLGLMIGASVKVDDMVEECKTFFFAGKHTTSNLLTWSTILLAMHPKWQVEAREEVAMVCGARGIPTKDDLVKLKTLTMIVNESLRLYPPTIATIRRAKADVELGKFKIPCGTELLIPILAVHHDQATWGSDANEFNPARFSNGVSAAARHPFAFIPFGLGARTCVGQNLALLQTKLTLAIMLSRFSFKLALTYRHAPTVLMLLYPQYGAPIIFQPIATTATTVDC* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1565 512 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 498 - -
Vra2g1565 512 Pfam Cytochrome P450 78 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vra2g1565 512 PANTHER CYTOCHROMEA2 6 498 - -
Vra2g1565 512 SUPERFAMILY Cytochrome P450 71 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1565 512 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1565 Vra-Chr2 23551882 23555439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1565 5 501 Cytochrome P450 AT2G26710 73.559 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1565 K15639 - gmx:100786200 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1565 2 23551882 23555439 Vra7g2217 7 42196013 42199609 PCT