Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1559 ATGGGAACCTCTGCAAACGCCGCTCCCGGTGGTCGAGGTGCCCCTGTTCCCAAAGACGTTGACTTTGCCAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGATATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAACGCCATCTTCGAGAACAAAAAACACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCGAAGAAGGTGTATGCAGTGGAAGCGACCAAGATGTCAGAACATGCCCGTGCACTCGTCAAGGCTAATAATCTCCAGAGTGTAGTTGAGGTCATCGAGGGATCAATGGAGGATGTTACCTTGCCTGAGAAAGTTGACGTGATCATCTCAGAGTGGATGGGTTATTTTCTTCTGCGAGAATCCATGTTTGATTCAGTTATACATGCTCGTGACCACTGGCTCAAACCGACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATCAGGACTGGGATAGTTGATCACAAATTAGGAGAATATGAATCAACTATGGATGATTGGAACAACTTCGTTGATGAAACAAAAACCTACTATGGTGTTGATATGAGCACTTTAACAAAGCCTTTTTCAGATGAGCAAAGAAAATACTATCTTCAGACATCTTTGTGGAACAACCTTCATCCACATCAAGTAATTGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGGCTGACATAGAAAAAGTGAGATCAAACTTTTCTTTGTCAATAACCATGGAAAACGCAAAGTTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTAAACAGGAGATTGAGTTAACTACGGCTCCCAGTGTGGATTACGGTACACATTGGGGCCAACAGGTTTTTCTTTTGCATCCTCCTGTGAATCTCAGTGAAGGTGATGATTTAAAGGTTTCTTTTCTGATGAGTCGCTCAAAGGCGAATCATCGTTTGATGGAGGTTGAACTTGGGTGTGAGATTCATCAGCATTCCGGCAAACTACTTGCACCTTTCAAAAATAAGTACTACATTGAGTAA 1122 0.4403 MGTSANAAPGGRGAPVPKDVDFANYFCTYAFLYHQKDMLSDRVRMDAYFNAIFENKKHFAGKTVLDVGTGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLQSVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKLGEYESTMDDWNNFVDETKTYYGVDMSTLTKPFSDEQRKYYLQTSLWNNLHPHQVIGTAAIIKEIDCLTATVADIEKVRSNFSLSITMENAKLCGFGGWFDVHFRGRSEDPAKQEIELTTAPSVDYGTHWGQQVFLLHPPVNLSEGDDLKVSFLMSRSKANHRLMEVELGCEIHQHSGKLLAPFKNKYYIE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1559 373 Gene3D - 166 373 - -
Vra2g1559 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 14 361 IPR025799 GO:0016274|GO:0018216
Vra2g1559 373 CDD AdoMet_MTases 63 163 - -
Vra2g1559 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Vra2g1559 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Vra2g1559 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Vra2g1559 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Vra2g1559 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 14 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1559 Vra-Chr2 23493461 23497577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1559 24 326 C2H2 Transcription Factor Family AT3G12270 31.173 2.76e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1559 K11434 - gmx:100795134 719.924