Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra2g1547 | ATGCTTTTAAGCTTTTACTCCCAAACCAAACAAGAAATTTTGCAGCTACCCTTTTTGTCCCGTAATCAAATGGCTGGGAATTCTCCATGTGCTTCATGCAAGCTTCTCAGACGAAGGTGTACCAAGGACTGCATCTTTGCTCCTTATTTCCCTTCCAATGACCCTCAAAAGTTCGCCTTAGTGCATAAGGTTTTTGGCGCTAGCAATGTTAGCAAAATGCTGCAGAGAGCAGATGCTGTGAGTAGTTTGGTGTACGAAGCACATGCAAGAGTTCGGGACCCTGTGTATGGCTGTGTTGGGGCCATATCCTATTTACAAAACCAGGTTTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAGGAGCCAGTGATGCCAAATCCAGAAATGGAAAACCCAGATCACAAATCTTACCTTCTCCAGAATGAACTCCCTCAGTTTCTCAACTATGCCTCTTCTAGCAATGTAATTTATGATGCTGTCTCAAGAGACAACATTTATGGACATGATATGGTTTCCTGA | 549 | 0.439 | MLLSFYSQTKQEILQLPFLSRNQMAGNSPCASCKLLRRRCTKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQRADAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPVMPNPEMENPDHKSYLLQNELPQFLNYASSSNVIYDAVSRDNIYGHDMVS* | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra2g1547 | 182 | Pfam | Lateral organ boundaries (LOB) domain | 29 | 120 | IPR004883 | - | |
Vra2g1547 | 182 | ProSiteProfiles | LOB domain profile. | 28 | 123 | IPR004883 | - | |
Vra2g1547 | 182 | Coils | Coil | 102 | 122 | - | - | |
Vra2g1547 | 182 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 12-LIKE | 24 | 175 | - | - | |
Vra2g1547 | 182 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 24 | 175 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra2g1547 | Vra-Chr2 | 23384313 | 23385331 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra2g1547 | 26 | 149 | AS2 family | AT2G30130 | 76.119 | 5.26e-67 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Vra2g1547 | LOB | 6.7e-37 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra2g1547 | - | - | gmx:121173085 | 286.96 |