Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1535 ATGGATATAGAAGATGTTCAAAACAAGACATTGGTATGCCAAAATCCCTACAGATATGGTCACGAGAATGTCTGGCAATCAGGCAATCCATTAGAATCCCCCACATGTCTTTTATTTATGCAGGGAGGAATGTTGTTTGGCCCTTCGGCTTTAGGGCACTTAAAGATTGTACACAAGGTCTTGTTCCCGATAAAGGGTTATGTTGTGCTTGAAACACTTTCATATTTTGGGCTCATGTTCTACTACTTCTTATGGAGTGTTAGATTAGATCTTTATACGGTGTTGAAGACAGAAAAGGTAGCTGTGGTTCTTGCTATGTCTGTATCCATATTTACATTTCTTATCCCTACTGGAATCTCGTTCCTGTTGAAGACCTATGTTGCAATGGAAAAAGATTTTGCAAACTCACTTCCATATATCGGTATCTCACAGACCTTTACTATATTCATTAGCATAGCAGTGCTCTTGACGGATCTCAAAATCCTTAATACTGACATAGGACGATTAGCCATATCAGTAGCAGTTATTACTGATATGATTGGCATGTTTTTGTCAATAATTACTTTTGCAGTAATTCAGTATACGGAAGGTGATATTCTCATACTAGTATCTGCCACTCTATCCTCATTTTTATTCGTGCTTTTTGTTGTATTTATGATGAGGCCAATGATACTTTGGATGGTAAAGAACCCAGGAAAAGGTTCGACAAATGAAATTTGCATTGTCTGTATCTTTGTCTTCATTATCCTTTCTGGACTTGTCGGTGAACTAATCGGACAGCATTTTTCCATGGGACCAATAATTTTAGGTCTGTCTCTTCCAGAAGGGCCACCCATAGGAACATCTTTGATGAAAAAACTTGAGATAATGTGTATGGCTTTTCTTTATCCAATCAGCCTAGCTGTTAACGGATTGGGGGTTGATGTATTCAATATGAACATTGATTATCTATGGGTTATATGCCTCATTATAGTTGTGGGTTTCTTTGCAAAGATTGGTGCTATCATGTTGCCAGGATACTATTTGAATATATCCATGAAAAAATGTTGGATCATTGGTCTCCTTCTAAATGGAAAGGGTATATGTGAGCTTGTCCTCTTCAATGTGTGGGTGGAAAGTCAGATAATAAATGAAGACGAAAAAACTATGATGGTTCTCTCTGTTATAGTAGTAAATGTTATCTTAGTAACAATGGTAAAATTCATGTACGACCCTTCAAAACCATATGATAATATAAGCAGATGGACAATTCAACATAGTAGAAGAGATTCTGAGCTCCGAATTATGGTGTGCATTGACGACAAGGAAACAGTCCCTACAATCCTGAACCTGTTAGAAGCCTCCTATGCTACTAGAGAAAGCACGATTGAGATTACAACGTTAGTCCTAGTTGAGCTTGAAGGAAGAGCAAGACCTGTTCTTGTTTCTAACCAATCACAAGAGAGTAACCATCAAGTCTTATACGGCTCAAATCATATCGATAACGCCTTGAGGCAATACGTACAACAAAATGAAGAACATGTCTCCATTAAATCATACACTTCAATATCCTTATTTGAAACGATGCATGATGATATTTGTAGAATATCACTGGAACGCGAGGTGAACATTTTGATCATGCCGTTCCATAAGAGGTGGGAAATTGATGGGACTGTTAAGGTTGCACATAGGTCCATCAGAACCATGAACATTAAAGTACTCCAAAAGGCACCATGTTCTGTGGGAATTCTAGTTGATAGGGGCATCTTGGGGGCCTCTCCTTCACTGGTGGGGACAAGAGAACCATATTACGTTGTGGTGTTTTTCATTGGTGGTGCAGATGACGTGGAGACACTGGCTTATAGCGCTAGAATGGCTAGGCAGGAGTATGTGTGGGTAACTGTGGTTAGGTTCCTTCTATTTGGTGAGGAAAATTCTAAGGACAGAAAACGTGACAGTGATCTTATAGATGAATATAGATACGAGAATGCTGGAAATAATAGGTTTGAGATTTTGGATGAAGTTGTGAAAGATGGGATAGATATGTCTATATGCATAAGAAGATTGGTGGATTATTTTGATCTTGTGATGGTGGGGAGGAGACATTCACAATATGCTATTCTTGAAGGACATGATAATTGGAGTGAGTGTGAAGAGTTAGGAGTTATTGGGGACATGCTAGCATCACCAAATTTTGTCACCAAGGCATCGGTGTTGGTCATACAACAACAAAGAATAAGAGGGAGAGTTATCAAACCAACTGCCAATTTCAATCAGGTCTCAAAAGATCAATATATGTCTAATGTTCCAATTAACGACTCATTAAGTCCTTCATGTACTATTTTGGTCGACAAGAATGACAAAATGTAA 2349 0.3836 MDIEDVQNKTLVCQNPYRYGHENVWQSGNPLESPTCLLFMQGGMLFGPSALGHLKIVHKVLFPIKGYVVLETLSYFGLMFYYFLWSVRLDLYTVLKTEKVAVVLAMSVSIFTFLIPTGISFLLKTYVAMEKDFANSLPYIGISQTFTIFISIAVLLTDLKILNTDIGRLAISVAVITDMIGMFLSIITFAVIQYTEGDILILVSATLSSFLFVLFVVFMMRPMILWMVKNPGKGSTNEICIVCIFVFIILSGLVGELIGQHFSMGPIILGLSLPEGPPIGTSLMKKLEIMCMAFLYPISLAVNGLGVDVFNMNIDYLWVICLIIVVGFFAKIGAIMLPGYYLNISMKKCWIIGLLLNGKGICELVLFNVWVESQIINEDEKTMMVLSVIVVNVILVTMVKFMYDPSKPYDNISRWTIQHSRRDSELRIMVCIDDKETVPTILNLLEASYATRESTIEITTLVLVELEGRARPVLVSNQSQESNHQVLYGSNHIDNALRQYVQQNEEHVSIKSYTSISLFETMHDDICRISLEREVNILIMPFHKRWEIDGTVKVAHRSIRTMNIKVLQKAPCSVGILVDRGILGASPSLVGTREPYYVVVFFIGGADDVETLAYSARMARQEYVWVTVVRFLLFGEENSKDRKRDSDLIDEYRYENAGNNRFEILDEVVKDGIDMSICIRRLVDYFDLVMVGRRHSQYAILEGHDNWSECEELGVIGDMLASPNFVTKASVLVIQQQRIRGRVIKPTANFNQVSKDQYMSNVPINDSLSPSCTILVDKNDKM* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1535 782 Pfam Sodium/hydrogen exchanger family 31 399 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra2g1535 782 Gene3D - 28 407 IPR038770 -
Vra2g1535 782 PANTHER CATION/H + ANTIPORTER 33 750 - -
Vra2g1535 782 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 33 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1535 Vra-Chr2 23268762 23271430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1535 4 736 Antiporter Super Family AT2G13620 32.282 1.27e-133 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1535 - - gmx:100779700 977.622