Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1528 ATGCATCATATAAAGAATGGAGATAAATGGCAGCTCTGCTTTCAATTAGTAATTCTTTGGAAGAAGGGAATATCGATCTTCTTCATCTTTCTGCTGCGATTTAAGAAGGCAGAGGACATGGATTGTTGTGTGTGTACAACTATGCCACTGATACTAAGGCCTCCGAGGAATACAATATGTGGAGCATGTTACGAAGGAGTAAGGAGCATAATCAACATGATGAGCAATTTCGAAACTGAGAAAGTAAAACCAGTAGTGGCCAATCCAAATCCAAACCCTTCTCCAGTTTCACGAAGAAATTCGAGTAAGACACTCGATGATTGTATAAGATGGTGTTCAGAGCATTTAGAACAGTTTAATCAGCAGAAGGAAGACTTGGTTTTTCTGCGAGGCTTTGTTGCAGCCTTCAAAGAACAGATTCACACAGACATATTGGTCATTCCAGGCAGACACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCTGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAATGCAAAGAAGCACCGAGTAAGAGCATAACTATACCCGATGTGAAGCACGAAGAATTAGAGTGTCTTATTGAGTTTCTGTACAGTGGAAGCTTGGGTGAGGAAAAATTGGAGAAACATGTGTACGCGCTGTCACAAGCAGCGGATAAGTATGTGATCCCACATTTGCTGAAACACTGCGAAGGGTACCTGCTGAGGTCGCTAAGCACTTGTAATGCCCTTGAGACACTGGAGATTGCGGACACTTGTTCCAACCAGAAGTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGACCGTGTTGTGTCATCACCTAAATTTGAAGCTTTTGTTCACAGGAGCCCACACCTCACCGTGCAACTCGTTACAATGGCCTTTGCCAATGCTGCTAAATAA 930 0.4269 MHHIKNGDKWQLCFQLVILWKKGISIFFIFLLRFKKAEDMDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNFETEKVKPVVANPNPNPSPVSRRNSSKTLDDCIRWCSEHLEQFNQQKEDLVFLRGFVAAFKEQIHTDILVIPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSKSITIPDVKHEELECLIEFLYSGSLGEEKLEKHVYALSQAADKYVIPHLLKHCEGYLLRSLSTCNALETLEIADTCSNQKLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTMAFANAAK* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1528 309 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 40 308 - -
Vra2g1528 309 SMART BTB_4 142 244 IPR000210 GO:0005515
Vra2g1528 309 CDD BTB_POZ_ZBTB_KLHL-like 141 227 - -
Vra2g1528 309 Gene3D Potassium Channel Kv1.1; Chain A 110 244 IPR011333 -
Vra2g1528 309 Gene3D - 245 309 - -
Vra2g1528 309 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 40 308 IPR044784 -
Vra2g1528 309 Pfam BTB/POZ domain 137 243 IPR000210 GO:0005515
Vra2g1528 309 ProSiteProfiles BTB domain profile. 142 212 IPR000210 GO:0005515
Vra2g1528 309 SUPERFAMILY POZ domain 128 242 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vra2g1528 BTB 9.1e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1528 K10523 - gmx:100777561 457.218