Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1515 ATGGCGGATCACTCAGACTCTTCTCCTCTCGTCCCTCCCCTTCCTCTCACCGACCCTTCCGAGATCGACCTCGAAGCCGGTCCCTCTGAACAAATCCAATGCCGAATTTGTCTCGAAACCGATGGTAGAGATTTCATAGCCCCTTGTAAGTGCAAAGGTACATCAAAATATGTACACCGAGAATGTTTGGATCATTGGCGAGCAGTTAAGGAAGGGTTTGCCTTTGCTCACTGCACAACATGCAAGGCTCCTTACCATTTGCGTGTTCATGTTGCTGCTGATAGGAAATGGCGTACCCTGAAATTTCGATTTTTTGTCACCCGAGACATTATGTTTATTTTTCTGTCTGTCCAGCTTGTCATTGCATCACTGGCATATTTGGTTTATCTAATAGATGGTTACCAGCAATATTGGCTTCGTCTTCTCTGGGGTTTTGATAGTGAAATGAGCTTTTACTACATATGTGGAGCTCTATTATTTTTCGCACTGCTTGGCCTATCTGGGTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTAGCTCAACCTTGTAGAGAAGTTTGTGCAGACTGTCATTTGCCTGGCACTCTCTGTATGTGGACTGATTGCACCACTTGCTTTGAGAGTTGTGGAACCATGGCAACTGAATGTGGTGGCTGTTTGGGGGGTGCTGGTGAAGCAGGGCTGCCATTATTATTCATAATGGCTTTGGTTGTTCTGGGACTTTTTACTGTAATTGGGATATTCTACAGTGTATTGGTGGCTACAATGGTAGGTCAGCGGATATGGCAACGTCATTATCACATACTTGCAAAAAGGATGCTAACAAAGGAGTATGTGGTTGAAGACGTCGATGGAGAGCTGACAGGGTCTGATTGGTCTCCCCCGGCTCTCCCTCCTGAGCATGTTCAGCAGTTGAAAGCATTGGGTCTACTATGA 945 0.454 MADHSDSSPLVPPLPLTDPSEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDIMFIFLSVQLVIASLAYLVYLIDGYQQYWLRLLWGFDSEMSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCREVCADCHLPGTLCMWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALVVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGELTGSDWSPPALPPEHVQQLKALGLL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1515 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 96 IPR013083 -
Vra2g1515 314 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Vra2g1515 314 SMART ringv_2 33 82 IPR011016 GO:0008270
Vra2g1515 314 SUPERFAMILY RING/U-box 29 86 - -
Vra2g1515 314 CDD RING_CH-C4HC3_MARCH 34 82 - -
Vra2g1515 314 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 314 - -
Vra2g1515 314 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Vra2g1515 314 PANTHER BNAA04G12620D PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1515 Vra-Chr2 23125716 23131257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1515 1 314 C3H Transcription Factor Family AT2G22120 82.716 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1515 - - gmx:100791777 616.69