Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra2g1514 | ATGACACCTCTCTCAAAGCTCTTTCACAAGTTCTGTGCCGAAATTATAATCATATTAGCATCCCTGATAATAGAACTTATCATTCTGATTCAGAAACTAAAACCATCGCCACGCGCAATCAGCACCCAGCAATACCTGAAATTCATCGAGAAGAAGAACCCCACGATTCGCTACACAAAGGGGTTGTTGAAGGCGGAACAGGGTGGTGCTGCAGAGTGTAGGGTATGCCTGTGCGAATTGGAGGAAGGGGAAAAGATGAGGAAGCTGCAATGCCGTCACGTGTTTCACAGGGATTGTTTGGACAAGTGGTTGCAACAATATTGGGCCACGTGTCCTCTTTGTCGGAAACAAGTGGTGCCGGAAGATGTTGTGTTCAAGCACCGTCAGCATCAGAATCAAACAGAGGGAGGTTTTGATCGGAATCATGATGACAACCTTCCGTACTTTTTATCAGCATTTCGTCGTGGCAACACTCTGCACAGATATTTCTGA | 492 | 0.4593 | MTPLSKLFHKFCAEIIIILASLIIELIILIQKLKPSPRAISTQQYLKFIEKKNPTIRYTKGLLKAEQGGAAECRVCLCELEEGEKMRKLQCRHVFHRDCLDKWLQQYWATCPLCRKQVVPEDVVFKHRQHQNQTEGGFDRNHDDNLPYFLSAFRRGNTLHRYF* | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra2g1514 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 73 | 115 | IPR001841 | - | |
Vra2g1514 | 163 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 158 | - | - | |
Vra2g1514 | 163 | PANTHER | - | 1 | 158 | - | - | |
Vra2g1514 | 163 | SMART | ring_2 | 73 | 114 | IPR001841 | - | |
Vra2g1514 | 163 | SUPERFAMILY | RING/U-box | 51 | 121 | - | - | |
Vra2g1514 | 163 | Pfam | Ring finger domain | 72 | 115 | IPR001841 | - | |
Vra2g1514 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 120 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra2g1514 | Vra-Chr2 | 23113105 | 23113889 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra2g1514 | 71 | 126 | C3H Transcription Factor Family | AT1G15100 | 57.143 | 4.55e-19 | 77.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra2g1514 | K16282 | - | gmx:102661897 | 217.238 |