Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1504 ATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAGGATTTGCACATGCAGGTTGACGTTGAGAAGAACGCAGAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGCAGATACTGCGAGGAAAACTATCTCTCACTATAAACAAAAGTTTTCCTCTCTCTCAGGTCAACCCTGCACCACACTCCTCATGTCACTTCTGCAGGCCGTTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCCACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCCAGTCTCTGTATTCCCCAGAGCATTGGATATGCAACCTTGGCACATCTTGATCCTCAATATGGACTTTATACAAGTGTGGTACCACCAATTGTATATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCATTGCTTTTATCCTCAATGATGGAGAAACTAGTAGACCCTGCTTCTGATCCAGTGGGTTATACAAAGCTAATTCTACTTGCTACTCTCTTGGCTGGCATCTTTCAGACTTCCTTCGGCCTCTTGAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTTCAATAGTTGGATTTGTGGCAGGAGCAGCCATCGTTATAGGGCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACCACCAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGCAGTTCATAATCCTTGGAATCCTCGAAATTTTATCCTTGGATGCTCGTTCTTGGTCTTCATCCTAACAACAAGATTTCTGAGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATTTCTCCTCTGGTGTCAGTTATTTTGTCGACTCTACTTGTGTTTTTGACAAAAGCTGATAAAAATGGAGTAAAAATCGTGAAACATGTCAAAGGAGGACTAAACCCGATCTCCATCCATGAGTTAGACTTCAGCAGCCCCCACATTGGAGAAGTCGCAAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACAGAATCTATTGCTGTTGGGCGATCTTTTGCATCCATCAAAGGATACCAACTAGATGGAAACAAGGAGATGATGTCAATAGGTCTCACAAACATCATAGGATCTTTTACCTCTTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCGATGACGGTCTTGGTATCGTTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTATAGCTATTCTTTCTTCTGTGATCCTATCTGCTCTCCCAGGACTTATTGACGTCACTGAAGCTTACAAAATCTGGAAGGTTGATAAGATAGACTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTTCTTTTTGCTTCTGTGGAGATTGGTCTGCTAGTGGCGGTGGTTATATCTTTTTCAAAGATCATTCTCATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCTGGCACTAACTTGTTCTGCGATGTCTATCAGTATCCAATGGCAGTTAAGATTCCAGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCTCTGAGGAAGAATCAGAAGATGACAAGGGAAATTCAACAACCACCATTCAACTCGTAATTCTTGACACCTCCAATTTAGTGAACATTGACACCTCTGGAATTGCTTCTCTGGAGGAACTGCACAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTTTCAAACTTTGTCTCCAAATTCGGTGGCAGAGTATTTCTCACTGTTGAAGAAGCTGTTGGCTGCAAGAGCCGCTGCTAA 1962 0.4383 MASSAMETCKSEDLHMQVDVEKNAEDVRSQWVLNAPEPPSPWRVVADTARKTISHYKQKFSSLSGQPCTTLLMSLLQAVFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPIVYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLLRLGFLVDFLSHASIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVMKAVWEAVHNPWNPRNFILGCSFLVFILTTRFLSKKKKKLFWLASISPLVSVILSTLLVFLTKADKNGVKIVKHVKGGLNPISIHELDFSSPHIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAMTVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDVTEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVSEEESEDDKGNSTTTIQLVILDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVSKFGGRVFLTVEEAVGCKSRC* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1504 653 TIGRFAM sulP: sulfate permease 81 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra2g1504 653 Pfam STAS domain 527 646 IPR002645 -
Vra2g1504 653 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Vra2g1504 653 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Vra2g1504 653 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Vra2g1504 653 Gene3D STAS domain 506 652 IPR036513 -
Vra2g1504 653 PANTHER SULFATE TRANSPORTER 2.1 31 649 - -
Vra2g1504 653 Pfam Sulfate permease family 94 474 IPR011547 GO:0016021
Vra2g1504 653 ProSiteProfiles STAS domain profile. 546 650 IPR002645 -
Vra2g1504 653 PANTHER SULFATE TRANSPORTER 31 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1504 Vra-Chr2 23032540 23037703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1504 28 647 Inorganic Solute Cotransporters AT5G10180 68.277 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1504 K17469 - gmx:100817831 1169.45