Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1503 ATGTGCAGGAGCTCTAGTAACTCAGAGATGGTAGCTTCGAAGAAAAGCACGTTAGAAGAGGTTTTGGACATTGAGACCAGCATGTCTCGGTCTCAGTGGGTGTTAAATCCTCCAGATCCACCCTCCATGCCACGTCAGGTCCTCGACAACGTCAAGGACATCCTCTTACCGCATCCTCAACCAAACACATTCTCTTCTCTCAGAAACCACCCCTTTCCCAAACGCGCTTTTGCTTTCTTCCAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCTCATAAGTTAAAATGCGATTTCATGGCCGGCCTTACCCTTGCAATCTTCGCCGTTCCTCAGTGTATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTATACAGGAATTGTACCACCTCTTATTTATGCTTTGCTAGCGAGTTCAAGGGAAACAGTGATTGGACCTGGATCTGTAGATTCATTGCTACTTTCCTCAATGATTCAGACATTGAAAGTTCCCATTGATGATTACACTCAACTTGTTTTCACTGTGACATTTTTTGCTGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTTGGTTTTCTGGTGGAATATATTTCCCAATCGACGATCGTAGGGTTCTTGGCAGCAGCTGCTGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAACAAAACTGCTTTATTTTCCGTGCTCAAATCTCTTTGGACATCCTTCAGAAACCAATCAGCGTGGCATCCCTACAACTTCGTCATTGGATTCTCATTCCTATGCTTCATCCTATTTACCAGATTCCTGGGTAAAAGGTACAAGAAACTGATCTGGTTGTCACACGTTGCTCCTCTCCTTTCAATTATCGTATCCTCTATCATTGCGTACAAAATAAATGTCGATGAGGCTCATATGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGGGGTAGCTTGAATCCAAGCTCATTCAATCAGTTAATATTTGATACCAAAGTTGTCGGTCATTTGATCAGAATAGGCTTGACCATTGCTATTATTTCAATAACGGGATCGATTGCTGTTGGACGATCATTTGCATCTCTAAAAGGACACAGCATTGATCCGAACAGAGAGGTGGTATCATTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTGTCACGTACTGCTGTAAACTACAATGCTGGGTCAGAAACAATGGTGTCGAACATAGTTATGGCACTGACGGTGCTGCTGTCGCTTAAATTTTTGACAGGACTTTTGTATTTCACTCCGAAAGCAATCTTAGCAGCAATAATTCTGTCGGCTGTACCAGGACTGATTGACCTAAACAAAGCTTCTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGAGTCTTGTTTGCATCTGCAGAAATAGGCCTTGCAGTTGGGATAACGGTTTCATTCACGAAGATAATTGTAACCTCAATTCAACCTGCTATAGCGGTTATTGGAAGGCTTCCAGGAACCGATTCATTCGGCGATGTTCAACAGTATCCGATGGCACTCAACACTCCCGGAGTTTTCATCGTCTCTCTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAAGAAAGGATTGAGAGATGGATGACCGATGAAAAAGCTTATAATATTCATGGCAGACCAGGACAAAACACCTTCCATCACCTCATCATAGATGCCTCAAGTCTTACCAACATTGACACCACTGGAATTGCTTGTCTGGTAGAGCTCAATAAGAATATGGCTTCACGCGGAATAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTCAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGTGGAAGCAGTGGATGCTTGTGTTGCCACTAAAATGGTTGCTGTATAA 2010 0.4269 MCRSSSNSEMVASKKSTLEEVLDIETSMSRSQWVLNPPDPPSMPRQVLDNVKDILLPHPQPNTFSSLRNHPFPKRAFAFFQNLFPILASFQNYNAHKLKCDFMAGLTLAIFAVPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSRETVIGPGSVDSLLLSSMIQTLKVPIDDYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTALFSVLKSLWTSFRNQSAWHPYNFVIGFSFLCFILFTRFLGKRYKKLIWLSHVAPLLSIIVSSIIAYKINVDEAHMKDYRVEVLGPIKGGGSLNPSSFNQLIFDTKVVGHLIRIGLTIAIISITGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKASEIWKVDKMDFLACAGAFFGVLFASAEIGLAVGITVSFTKIIVTSIQPAIAVIGRLPGTDSFGDVQQYPMALNTPGVFIVSLKSAWLCFANANLVEERIERWMTDEKAYNIHGRPGQNTFHHLIIDASSLTNIDTTGIACLVELNKNMASRGIKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVVEAVDACVATKMVAV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1503 669 Pfam Sulfate permease family 98 484 IPR011547 GO:0016021
Vra2g1503 669 PANTHER EARLY NODULIN-70 19 668 - -
Vra2g1503 669 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Vra2g1503 669 Pfam STAS domain 537 657 IPR002645 -
Vra2g1503 669 PANTHER SULFATE TRANSPORTER 19 668 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra2g1503 669 ProSiteProfiles STAS domain profile. 556 661 IPR002645 -
Vra2g1503 669 TIGRFAM sulP: sulfate permease 85 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra2g1503 669 SUPERFAMILY SpoIIaa-like 543 661 IPR036513 -
Vra2g1503 669 CDD STAS_SulP_like_sulfate_transporter 537 655 - -
Vra2g1503 669 Gene3D STAS domain 516 665 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1503 Vra-Chr2 23019595 23026631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1503 29 666 Inorganic Solute Cotransporters AT5G10180 53.042 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1503 K17469 - gmx:100817841 1073.92