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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vra2g1469
ATGAAGAGACTTAGCAGCTCAGATTCTTCTTCCACTCCCCTCATCACAATTTGCCCGTCAACAGAGGAACACAGTACGAGAAACTGCCAACAGCACGTGTATGGTAGGGAGTTCCAATCGATGATGCTTGAGGGGCTTGACGAGGAAGGATGTGTTGAAGAAGTGGGGCATCAATCTGAGAAAAAACGGCGACTGAGTGTAGATCAAGTTAAGGCTTTGGAGAAGAACTTCGAGGTTGAAAACAAGCTTGAACCTGAGAGGAAGGTCAAACTTGCCCAAGAACTTGGGTTGCAACCTAGACAAGTAGCTGTCTGGTTCCAAAACCGTCGAGCAAGGTGGAAAACCAAACAATTGGAGAGAGATTACGGTGTTCTCAAAGCCAATTTTGATGCCCTCAAGCTTAACTATGACACCCTCAATCACGACAACGAAGCTTTACGGAAGCAGATAAAGGAACTGAAATCGAGGCTGGAGGAAGAGAACACAGGAAGCGGTGTTTCCGTGAAGGAAGAGATAATGATGCCTGACTCGGAAGACAAAACAACGATGGAACAAAGTAAGAGCGAGCCGAGTTCGGAATCCGAGGATCAGTTGAACTACGAGTGTTTAAACAACAACAAGAACAGCGCTTGTTTCGGAGGCGCCTCGCTCTTTCCAGTGGACTTCAAAGACGGTTCTTCCGACAGCGATTCGAGCGCGATCTTGAACGAAGAGAACCACTGCAGCCCCATAACCGAACATCTCTTGCTGTCACCGGAATCTTCCTCAATGAACTGTTTGCAGTTTCAGAAAGCGTATCAGGCGCAGTACGTGGTGAAGATGGAGGAGCACAACTTCTTCAGCGCCGATGAGGCCTGCAATTTCTTTTCTGATGAACAAGCTCCGACGTTGCAGTGGTGGAGCTGA
906
0.4801
MKRLSSSDSSSTPLITICPSTEEHSTRNCQQHVYGREFQSMMLEGLDEEGCVEEVGHQSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANFDALKLNYDTLNHDNEALRKQIKELKSRLEEENTGSGVSVKEEIMMPDSEDKTTMEQSKSEPSSESEDQLNYECLNNNKNSACFGGASLFPVDFKDGSSDSDSSAILNEENHCSPITEHLLLSPESSSMNCLQFQKAYQAQYVVKMEEHNFFSADEACNFFSDEQAPTLQWWS*
302
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vra2g1469
301
ProSitePatterns
'Homeobox' domain signature.
91
114
IPR017970
GO:0000981|GO:0006355
Vra2g1469
301
Coils
Coil
129
163
-
-
Vra2g1469
301
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE
1
240
-
-
Vra2g1469
301
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE
251
296
-
-
Vra2g1469
301
MobiDBLite
consensus disorder prediction
172
191
-
-
Vra2g1469
301
Gene3D
-
55
123
-
-
Vra2g1469
301
Pfam
Homeobox associated leucine zipper
116
157
IPR003106
GO:0006355|GO:0043565
Vra2g1469
301
SMART
HOX_1
59
120
IPR001356
GO:0003677
Vra2g1469
301
ProSiteProfiles
'Homeobox' domain profile.
56
116
IPR001356
GO:0003677
Vra2g1469
301
MobiDBLite
consensus disorder prediction
156
198
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vra2g1469
Vra-Chr2
22683300
22685678
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vra2g1469
1
301
Homeobox Transcription Factor Family
AT2G22430
48.910
2.99e-73
226
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Vra2g1469
Homeodomain
2.4e-16
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vra2g1469
K09338
-
gmx:100777924
412.92
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