Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1443 ATGGCAGCTCTGTTACCTTGCGCGCCCAACGTAGTCTTTGCTCCGTTCGGGAACCGGAGCACGAGCCGCCTCCCCAACCGTCCTCAATCTCACGCTTTCTCCGGTTCGACCAGACACTTTCTTCGCGGCTCCCTCTCCGTCGCCCGGTTCGGATTCAAACCCGAGTTCTTGCCCGAGCCGGAGGACACTGAAGGCTTGCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTTTTTACACGATTGCAGACGCCGCCGTTTCTTCTTCTTCCGACACGGTTGCTGCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCCGGAATCACTAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAGCAGGTAGAATCCGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGACTTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACCATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCGAATGTGGCAGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACCACAATTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTGTCCCTCCCCTTGGATGGTCAGATACATTGGCTTATCTGGTCTTGCCGGTGTTGCTGATCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGTTATCATAAAAAATGAAGGAACCCAGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAATAGTGGAAGAAGCCGGCCAAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAGAAAAAAGGAAATTCATGGAAGCAGCAGCTAGAGAGACTAAAGTAGATGATAGTCACGTGACACTTGAGAAAACTGGAGGTGATTTAACTGTTGAAAAATCTCGGTCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTGGTAAATGGTAACTTTTTAAGTACAGGCTTAGAGGGAAATCAGAATTTTACATCTACATCTGAGACAGAAAATAATGAAGGCTCTGCTCATTTCAACAATGATGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAATATTAACATCTACAACCACTGCAAACACACAACCTCCTGCAGAAGATGCAGATCGCATGACAAAGGATTGA 1611 0.4556 MAALLPCAPNVVFAPFGNRSTSRLPNRPQSHAFSGSTRHFLRGSLSVARFGFKPEFLPEPEDTEGLLRELFGRAEGLFYTIADAAVSSSSDTVAASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERLQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGVPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDVIIKNEGTQVQKSISKLNSTIVEEAGQSEKTSEGPQPGDRFKQLKEQEARRRQQREEEEKRKFMEAAARETKVDDSHVTLEKTGGDLTVEKSRSVGSDTDPSISGVVNGNFLSTGLEGNQNFTSTSETENNEGSAHFNNDEINEKNSDKEPREILTSTTTANTQPPAEDADRMTKD* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1443 536 Coils Coil 401 426 - -
Vra2g1443 536 MobiDBLite consensus disorder prediction 450 497 - -
Vra2g1443 536 MobiDBLite consensus disorder prediction 513 527 - -
Vra2g1443 536 Pfam 60Kd inner membrane protein 133 347 IPR001708 GO:0016021|GO:0032977
Vra2g1443 536 MobiDBLite consensus disorder prediction 498 512 - -
Vra2g1443 536 PANTHER OXA1 45 467 IPR001708 GO:0016021|GO:0032977
Vra2g1443 536 MobiDBLite consensus disorder prediction 395 448 - -
Vra2g1443 536 MobiDBLite consensus disorder prediction 384 536 - -
Vra2g1443 536 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 347 IPR028055 -
Vra2g1443 536 PANTHER BNAA09G28180D PROTEIN 45 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1443 Vra-Chr2 22503555 22510496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1443 70 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.897 1.78e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1443 K03217 - gmx:100815190 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1443 2 22503555 22510496 Vra2g1443 2 22503555 22510496 ECH