Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1434 ATGTGTTTATGGTCTCTTTTTGTGATTACACTTCTTCTTGTGCTGAGATCACATGTGCTTTGCCAACTTGAAGAGTTTATCAGTATTGACTGCGGAGGGACAAGTAACTACACTGATAAAGGAACGGGGCTTTCATGGATATCAGATTCTGGGATGATGAAACATGGGAAATCAGTGTTGGTACAAAATCGTAGAGAAAACAAGGTTCAGTATCAGAGACGCAGAGACTTTCCAATTGACAGCAGAAAATACTGTTATACACTTGGTTCTGAGCAGAGAAGAAGGTATCTAGTGCGAGCAACGTTTCAGTATGGTATCTTGGATGACGGTGACACATACCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCACAAGAACTTATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCCATTGATGTTTGCGTGTGCTGTGCTACCACTGGTTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGAGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTAGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAACTATCTGGTTGGGGTGGCCCCAGGCACTGAAAGAATTAATACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAGACTGCAGTTGTTGGCACAAAAGGAGTCCTTAGCTATAGACTAAACCTAGAAGACTTCCCTGGAAATGCTAGAGCTTATGCATATTTTGCAGAGATTGAAGATCTGGCTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTACAGTAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGACCTACACTCTTTATGAACCAAGTTATATGAACGTGAGTCTTGAGTTTGTGCTTTCGTTCTCCTTTGTTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCGAAGACTGACAGACAAGATTCAAACTTTGTTAATGCGTTTCGCTTCTTATCAGCTGGAAGTGCCCTGATGAATGAAGGTGATCCCTGTGTTCCAACTCCCTGGGACTGGATAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAACCTGTCACGAAGGAATCTGAAGGGTGAAATCCCGAGGGATCTCAACAACATGGAATCATTGACAGAACTGTGGCTGGACGGGAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTCAATCTAAAGATTGTGCATCTGGAGAACAACAGATTGACTGGTCCCTTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTTCATACAGAATAACTCTTTTAGTGGGGTAATACCATCAGGTTTACTGTCAGGCAAAATAATTTTCAACTTTGATGATAATCCCGAACTGCATAAAGGGAGCAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGGGATTCTGTTAATATTATTCTTAGCAAGTTTGGTTCTATTGCTTAATCTGCGGAGAAAAACTTCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGGCGCAGCAGTACTAAACCTTTAACTGGATATTCATTTGGTCGGGGTGGAAATTTAATGGATGAAGGTACTGCTTGCTATATTACACTCTCTGAGTTGAAAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGTGATGGAAAAGAGGTGGCAGTTAAGACTATGACCGATCTATCAAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATGCTGGTTTACGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCACGAATGTTCGAACCAGAAGCAATTGGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAGAGGTCTTGAATACTTACACACAGGATGCAATCCAAGTATCATTCACCGTGATGTGAAGACAAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTTTCAAGACTCGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTATCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAGAGTGATGTGTATAGTTTTGGAGTCGTTCTGTTGGAACTGATATCAGGAAAAAAACCTGTATCCTCAGAAGACTATGGTCCTGAAATGAACATCGTTCACTGGGTAAGATCCTTAATTCGTAAAGGAGATGTTATAAGCATTATGGATCCTTCCCTTGTGGGGAATGCCAAAACTGAATCAATTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGTGCCTACAGGCCAAAAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAGCATTGAAAAAGGCACAGAAAATCAACTCAAGTTATCATCTTCGGGCGGTTCAAAGCCACAGTCTTCTCGTAAGACTTTGCTTGCAAGTTTTCTAGAAATTGAGAGCCCTGACTTGTCTAATTCTTGCCTCCCCTCAGCCAGATAA 2793 0.406 MCLWSLFVITLLLVLRSHVLCQLEEFISIDCGGTSNYTDKGTGLSWISDSGMMKHGKSVLVQNRRENKVQYQRRRDFPIDSRKYCYTLGSEQRRRYLVRATFQYGILDDGDTYPQFQLYLDATKWATVSIYDATRTYVKEMIFRAPSNSIDVCVCCATTGSPFISTLELRPLNLSMYATDFESSFFLKVAARINFGAPSEDVVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIEIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPGNARAYAYFAEIEDLAKNETRKFKLEQPYIADYSNAVVNIAENANGTYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPLLNAMEISKYVQIASKTDRQDSNFVNAFRFLSAGSALMNEGDPCVPTPWDWINCSTTTPPRITKINLSRRNLKGEIPRDLNNMESLTELWLDGNLLTGQLPDMSNLVNLKIVHLENNRLTGPLPSYLGSLPSLQALFIQNNSFSGVIPSGLLSGKIIFNFDDNPELHKGSKKHFQLMLGISIGVLGILLILFLASLVLLLNLRRKTSRQKRDEKGISGRSSTKPLTGYSFGRGGNLMDEGTACYITLSELKEATNNFSKKIGKGSFGSVYYGKMSDGKEVAVKTMTDLSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHMLVYEYMHNGTLREYIHECSNQKQLDWLARLRIAEDAARGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESIWRVAEIAMQCVEQHGAYRPKMQEVILAIQDASSIEKGTENQLKLSSSGGSKPQSSRKTLLASFLEIESPDLSNSCLPSAR* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1434 930 Gene3D Phosphorylase Kinase; domain 1 587 683 - -
Vra2g1434 930 Pfam Malectin-like domain 29 362 IPR024788 -
Vra2g1434 930 PANTHER - 17 893 - -
Vra2g1434 930 SMART serkin_6 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1434 930 SUPERFAMILY L domain-like 399 509 - -
Vra2g1434 930 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Vra2g1434 930 Gene3D Ribonuclease Inhibitor 373 521 IPR032675 -
Vra2g1434 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Vra2g1434 930 ProSiteProfiles Protein kinase domain profile. 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1434 930 SUPERFAMILY Protein kinase-like (PK-like) 594 875 IPR011009 -
Vra2g1434 930 PANTHER OS07G0107800 PROTEIN-RELATED 17 893 - -
Vra2g1434 930 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Vra2g1434 930 Gene3D Transferase(Phosphotransferase) domain 1 684 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1434 Vra-Chr2 22450381 22456407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1434 1 930 Receptor kinase-like Gene Family AT1G67720 69.132 0.0 1294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra2g1434 Malectin_like 2.8e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1434 - - gmx:100807148 1674.06